NPs Basic Information

Name
Phochrodine D
Molecular Formula C15H13NO5
IUPAC Name*
7-hydroxy-8-methoxy-2-methyl-5H-chromeno[4,3-b]pyridine-10-carboxylic acid
SMILES
CC1=NC2=C(COC3=C2C(=CC(=C3O)OC)C(=O)O)C=C1
InChI
InChI=1S/C15H13NO5/c1-7-3-4-8-6-21-14-11(12(8)16-7)9(15(18)19)5-10(20-2)13(14)17/h3-5,17H,6H2,1-2H3,(H,18,19)
InChIKey
SQENGMNHWKNGES-UHFFFAOYSA-N
Synonyms
Phochrodine D
CAS NA
PubChem CID 146684264
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Chromenopyridines

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 287.27 ALogp: 1.6
HBD: 2 HBA: 6
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 88.9 Aromatic Rings: 3
Heavy Atoms: 21 QED Weighted: 0.882

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.109 MDCK Permeability: 0.00001110
Pgp-inhibitor: 0.006 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.009 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.005

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.03 Plasma Protein Binding (PPB): 94.51%
Volume Distribution (VD): 0.415 Fu: 3.38%

ADMET: Metabolism

CYP1A2-inhibitor: 0.05 CYP1A2-substrate: 0.873
CYP2C19-inhibitor: 0.022 CYP2C19-substrate: 0.06
CYP2C9-inhibitor: 0.065 CYP2C9-substrate: 0.076
CYP2D6-inhibitor: 0.031 CYP2D6-substrate: 0.147
CYP3A4-inhibitor: 0.044 CYP3A4-substrate: 0.138

ADMET: Excretion

Clearance (CL): 1.858 Half-life (T1/2): 0.813

ADMET: Toxicity

hERG Blockers: 0.097 Human Hepatotoxicity (H-HT): 0.507
Drug-inuced Liver Injury (DILI): 0.981 AMES Toxicity: 0.066
Rat Oral Acute Toxicity: 0.186 Maximum Recommended Daily Dose: 0.036
Skin Sensitization: 0.07 Carcinogencity: 0.447
Eye Corrosion: 0.003 Eye Irritation: 0.061
Respiratory Toxicity: 0.384
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004182 0.652 D07JGT 0.333
ENC004180 0.632 D0G5UB 0.297
ENC004181 0.562 D07MGA 0.293
ENC005028 0.366 D0C4YC 0.279
ENC004956 0.360 D01WJL 0.279
ENC002148 0.356 D06GCK 0.270
ENC004954 0.356 D0A5SE 0.269
ENC004955 0.356 D0QD1G 0.268
ENC003863 0.349 D0E6OC 0.263
ENC000296 0.343 D04UTT 0.259
*Note: the compound similarity was calculated by RDKIT.