NPs Basic Information

Name
Phomolactonexanthone A
Molecular Formula C34H34O14
IUPAC Name*
[(2R)-8-[(5R,6R,10aR)-5-acetyloxy-1,9-dihydroxy-10a-(hydroxymethyl)-6-methyl-8-oxo-6,7-dihydro-5H-xanthen-2-yl]-5-hydroxy-2-[(2S,3S)-3-methyl-5-oxooxolan-2-yl]-4-oxo-3H-chromen-2-yl]methyl acetate
SMILES
C[C@@H]1CC(=O)C2=C(C3=C(C=CC(=C3O)C4=C5C(=C(C=C4)O)C(=O)C[C@@](O5)(COC(=O)C)[C@@H]6[C@H](CC(=O)O6)C)O[C@@]2([C@@H]1OC(=O)C)CO)O
InChI
InChI=1S/C34H34O14/c1-14-9-21(39)27-29(43)26-23(47-34(27,12-35)32(14)45-17(4)37)8-6-18(28(26)42)19-5-7-20(38)25-22(40)11-33(48-30(19)25,13-44-16(3)36)31-15(2)10-24(41)46-31/h5-8,14-15,31-32,35,38,42-43H,9-13H2,1-4H3/t14-,15+,31+,32-,33-,34+/m1/s1
InChIKey
DRCRIEWXXYROPQ-VVISUSTOSA-N
Synonyms
Phomolactonexanthone A
CAS NA
PubChem CID 139585097
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Xanthenes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 666.6 ALogp: 2.4
HBD: 4 HBA: 14
Rotatable Bonds: 8 Lipinski's rule of five: Rejected
Polar Surface Area: 212.0 Aromatic Rings: 6
Heavy Atoms: 48 QED Weighted: 0.256

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.45 MDCK Permeability: 0.00001360
Pgp-inhibitor: 0.594 Pgp-substrate: 0.299
Human Intestinal Absorption (HIA): 0.682 20% Bioavailability (F20%): 0.126
30% Bioavailability (F30%): 0.826

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.008 Plasma Protein Binding (PPB): 83.29%
Volume Distribution (VD): 0.6 Fu: 13.85%

ADMET: Metabolism

CYP1A2-inhibitor: 0.062 CYP1A2-substrate: 0.054
CYP2C19-inhibitor: 0.056 CYP2C19-substrate: 0.061
CYP2C9-inhibitor: 0.352 CYP2C9-substrate: 0.332
CYP2D6-inhibitor: 0.242 CYP2D6-substrate: 0.096
CYP3A4-inhibitor: 0.77 CYP3A4-substrate: 0.263

ADMET: Excretion

Clearance (CL): 1.825 Half-life (T1/2): 0.149

ADMET: Toxicity

hERG Blockers: 0.029 Human Hepatotoxicity (H-HT): 0.962
Drug-inuced Liver Injury (DILI): 0.975 AMES Toxicity: 0.067
Rat Oral Acute Toxicity: 0.913 Maximum Recommended Daily Dose: 0.213
Skin Sensitization: 0.052 Carcinogencity: 0.115
Eye Corrosion: 0.003 Eye Irritation: 0.01
Respiratory Toxicity: 0.039
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002870 0.713 D0T5XN 0.277
ENC005069 0.693 D01XDL 0.272
ENC001973 0.650 D01XWG 0.272
ENC003348 0.641 D0C9XJ 0.267
ENC001969 0.639 D07VLY 0.267
ENC001991 0.631 D07IPB 0.263
ENC002978 0.630 D0Q0PR 0.263
ENC002105 0.583 D0FX2Q 0.257
ENC001968 0.565 D01UBX 0.255
ENC005074 0.564 D08LTU 0.253
*Note: the compound similarity was calculated by RDKIT.