NPs Basic Information

Name
Dicerandrol C
Molecular Formula C38H38O16
IUPAC Name*
[(3R,4R,4aR)-7-[(5R,6R,10aR)-5-acetyloxy-10a-(acetyloxymethyl)-1,9-dihydroxy-6-methyl-8-oxo-6,7-dihydro-5H-xanthen-2-yl]-4-acetyloxy-8,9-dihydroxy-3-methyl-1-oxo-3,4-dihydro-2H-xanthen-4a-yl]methyl acetate
SMILES
C[C@@H]1CC(=O)C2=C(C3=C(C=CC(=C3O)C4=C(C5=C(C=C4)O[C@@]6([C@@H]([C@@H](CC(=O)C6=C5O)C)OC(=O)C)COC(=O)C)O)O[C@@]2([C@@H]1OC(=O)C)COC(=O)C)O
InChI
InChI=1S/C38H38O16/c1-15-11-23(43)29-33(47)27-25(53-37(29,13-49-17(3)39)35(15)51-19(5)41)9-7-21(31(27)45)22-8-10-26-28(32(22)46)34(48)30-24(44)12-16(2)36(52-20(6)42)38(30,54-26)14-50-18(4)40/h7-10,15-16,35-36,45-48H,11-14H2,1-6H3/t15-,16-,35-,36-,37+,38+/m1/s1
InChIKey
KYQPTDIMYDSMHS-ACMZUNAXSA-N
Synonyms
Dicerandrol C; CHEBI:65766; (5R,5'R,6R,6'R,10aR,10a'R)-10a,10a'-bis[(acetyloxy)methyl]-1,1',8,8'-tetrahydroxy-6,6'-dimethyl-9,9'-dioxo-5,5',7,7',9,9',10a,10a'-octahydro-6H,6'H-2,2'-bixanthene-5,5'-diyl diacetate; Dicerandrols C; CHEMBL507894; DTXSID401336290; Q27134253; [(3R,4R,4aR)-7-[(5R,6R,10aR)-5-acetyloxy-10a-(acetyloxymethyl)-1,9-dihydroxy-6-methyl-8-oxo-6,7-dihydro-5H-xanthen-2-yl]-4-acetyloxy-8,9-dihydroxy-3-methyl-1-oxo-3,4-dihydro-2H-xanthen-4a-yl]methyl acetate; 361445-55-8
CAS 361445-55-8
PubChem CID 11093875
ChEMBL ID CHEMBL507894
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Xanthenes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 750.7 ALogp: 2.7
HBD: 4 HBA: 16
Rotatable Bonds: 11 Lipinski's rule of five: Rejected
Polar Surface Area: 239.0 Aromatic Rings: 6
Heavy Atoms: 54 QED Weighted: 0.226

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.393 MDCK Permeability: 0.00003580
Pgp-inhibitor: 0.948 Pgp-substrate: 0.342
Human Intestinal Absorption (HIA): 0.714 20% Bioavailability (F20%): 0.423
30% Bioavailability (F30%): 0.874

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.002 Plasma Protein Binding (PPB): 80.46%
Volume Distribution (VD): 0.486 Fu: 17.35%

ADMET: Metabolism

CYP1A2-inhibitor: 0.036 CYP1A2-substrate: 0.036
CYP2C19-inhibitor: 0.136 CYP2C19-substrate: 0.062
CYP2C9-inhibitor: 0.7 CYP2C9-substrate: 0.249
CYP2D6-inhibitor: 0.361 CYP2D6-substrate: 0.084
CYP3A4-inhibitor: 0.657 CYP3A4-substrate: 0.377

ADMET: Excretion

Clearance (CL): 1.855 Half-life (T1/2): 0.133

ADMET: Toxicity

hERG Blockers: 0.019 Human Hepatotoxicity (H-HT): 0.995
Drug-inuced Liver Injury (DILI): 0.974 AMES Toxicity: 0.028
Rat Oral Acute Toxicity: 0.975 Maximum Recommended Daily Dose: 0.113
Skin Sensitization: 0.027 Carcinogencity: 0.017
Eye Corrosion: 0.003 Eye Irritation: 0.013
Respiratory Toxicity: 0.028
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001969 0.896 D07IPB 0.257
ENC001973 0.881 D0Q0PR 0.256
ENC004764 0.825 D0T5XN 0.247
ENC001968 0.802 D0FX2Q 0.246
ENC002870 0.786 D01XWG 0.245
ENC001991 0.769 D01XDL 0.245
ENC002978 0.701 D0OL7F 0.241
ENC005075 0.678 D07VLY 0.235
ENC005074 0.587 D0C9XJ 0.235
ENC003646 0.583 D01UBX 0.235
*Note: the compound similarity was calculated by RDKIT.