NPs Basic Information

Name
3-O-desmethyl-phomentrioloxin
Molecular Formula C16H22O4
IUPAC Name*
(1R,2R,3R,4R)-5-(7-methyl-3-methylideneoct-6-en-1-ynyl)cyclohex-5-ene-1,2,3,4-tetrol
SMILES
CC(=CCCC(=C)C#CC1=C[C@H]([C@H]([C@@H]([C@@H]1O)O)O)O)C
InChI
InChI=1S/C16H22O4/c1-10(2)5-4-6-11(3)7-8-12-9-13(17)15(19)16(20)14(12)18/h5,9,13-20H,3-4,6H2,1-2H3/t13-,14-,15-,16-/m1/s1
InChIKey
XXKZDPIKARAWFU-KLHDSHLOSA-N
Synonyms
3-O-desmethyl-phomentrioloxin; 3-O-Desmethylphomentrioloxin; J3.652.054J
CAS NA
PubChem CID 121233005
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Alcohols and polyols
          • Direct Parent: Cyclitols and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 278.34 ALogp: 1.1
HBD: 4 HBA: 4
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 80.9 Aromatic Rings: 1
Heavy Atoms: 20 QED Weighted: 0.46

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.15 MDCK Permeability: 0.00001120
Pgp-inhibitor: 0.001 Pgp-substrate: 0.582
Human Intestinal Absorption (HIA): 0.739 20% Bioavailability (F20%): 0.078
30% Bioavailability (F30%): 0.421

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.052 Plasma Protein Binding (PPB): 94.43%
Volume Distribution (VD): 1.944 Fu: 1.62%

ADMET: Metabolism

CYP1A2-inhibitor: 0.078 CYP1A2-substrate: 0.044
CYP2C19-inhibitor: 0.083 CYP2C19-substrate: 0.563
CYP2C9-inhibitor: 0.195 CYP2C9-substrate: 0.864
CYP2D6-inhibitor: 0.006 CYP2D6-substrate: 0.074
CYP3A4-inhibitor: 0.037 CYP3A4-substrate: 0.08

ADMET: Excretion

Clearance (CL): 4.416 Half-life (T1/2): 0.754

ADMET: Toxicity

hERG Blockers: 0.031 Human Hepatotoxicity (H-HT): 0.805
Drug-inuced Liver Injury (DILI): 0.906 AMES Toxicity: 0.503
Rat Oral Acute Toxicity: 0.705 Maximum Recommended Daily Dose: 0.957
Skin Sensitization: 0.957 Carcinogencity: 0.32
Eye Corrosion: 0.01 Eye Irritation: 0.49
Respiratory Toxicity: 0.971
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002872 0.758 D02HYK 0.245
ENC004551 0.581 D05ZYM 0.227
ENC004553 0.542 D0H3KI 0.217
ENC004558 0.493 D07HZY 0.215
ENC004552 0.461 D0HR8Z 0.208
ENC004554 0.434 D0X7XG 0.206
ENC002153 0.400 D0MU9L 0.206
ENC004557 0.384 D0H2RI 0.200
ENC004335 0.333 D07NSU 0.200
ENC004334 0.333 D0D0ZD 0.200
*Note: the compound similarity was calculated by RDKIT.