NPs Basic Information

Name
9-deoxyhymatoxin A
Molecular Formula C20H30O6S
IUPAC Name*
2-[(1R,2S,5S,9R,12S,16R)-1,5,12-trimethyl-11-oxo-10-oxatetracyclo[7.6.1.02,7.012,16]hexadec-7-en-5-yl]ethyl hydrogen sulfate
SMILES
C[C@@]1(CC[C@H]2C(=C[C@@H]3[C@@H]4[C@@]2(CCC[C@@]4(C(=O)O3)C)C)C1)CCOS(=O)(=O)O
InChI
InChI=1S/C20H30O6S/c1-18(9-10-25-27(22,23)24)8-5-14-13(12-18)11-15-16-19(14,2)6-4-7-20(16,3)17(21)26-15/h11,14-16H,4-10,12H2,1-3H3,(H,22,23,24)/t14-,15+,16+,18+,19+,20-/m0/s1
InChIKey
ZRFMKYKOLFQQPF-QWFGBESBSA-N
Synonyms
9-deoxyhymatoxin A; 9-deoxy-hymatoxin A; (-)-9-deoxyhymatoxin A; (-)-9-deoxy-hymatoxin A; CHEBI:141328; (6beta,13alpha)-18-oxo-6,18-epoxypimar-7-en-16-yl hydrogen sulfate; (1S)-10beta-Hydroxy-7alpha-[2-(sulfooxy)ethyl]-1,4abeta,7-trimethyl-1,2,3,4,4a,4balpha,5,6,7,8,10,10aalpha-dodecahydrophenanthrene-1beta-carboxylic acid 1,10-lactone
CAS NA
PubChem CID 102357824
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Terpene lactones
          • Direct Parent: Diterpene lactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 398.5 ALogp: 3.5
HBD: 1 HBA: 6
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 98.3 Aromatic Rings: 4
Heavy Atoms: 27 QED Weighted: 0.429

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.327 MDCK Permeability: 0.00001460
Pgp-inhibitor: 0.002 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.475 20% Bioavailability (F20%): 0.998
30% Bioavailability (F30%): 0.951

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.053 Plasma Protein Binding (PPB): 88.65%
Volume Distribution (VD): 0.807 Fu: 4.99%

ADMET: Metabolism

CYP1A2-inhibitor: 0.009 CYP1A2-substrate: 0.955
CYP2C19-inhibitor: 0.019 CYP2C19-substrate: 0.78
CYP2C9-inhibitor: 0.077 CYP2C9-substrate: 0.084
CYP2D6-inhibitor: 0.004 CYP2D6-substrate: 0.101
CYP3A4-inhibitor: 0.334 CYP3A4-substrate: 0.117

ADMET: Excretion

Clearance (CL): 1.766 Half-life (T1/2): 0.079

ADMET: Toxicity

hERG Blockers: 0.021 Human Hepatotoxicity (H-HT): 0.453
Drug-inuced Liver Injury (DILI): 0.069 AMES Toxicity: 0.156
Rat Oral Acute Toxicity: 0.518 Maximum Recommended Daily Dose: 0.864
Skin Sensitization: 0.202 Carcinogencity: 0.4
Eye Corrosion: 0.006 Eye Irritation: 0.026
Respiratory Toxicity: 0.979
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003258 0.614 D01CKY 0.277
ENC002056 0.408 D0Z1XD 0.274
ENC005049 0.390 D08TEJ 0.273
ENC005750 0.376 D04GJN 0.268
ENC005747 0.370 D0X4RS 0.264
ENC005256 0.368 D0IX6I 0.261
ENC005748 0.363 D0I2SD 0.257
ENC005203 0.354 D0T0LU 0.257
ENC002394 0.354 D02CJX 0.252
ENC001928 0.354 D0U3GL 0.250
*Note: the compound similarity was calculated by RDKIT.