NPs Basic Information

Name
Geniculol
Molecular Formula C20H26O6
IUPAC Name*
(1S,2R,3S,4R,9R,12R,15S,19R)-2,3-dihydroxy-1,4,15-trimethyl-8,13-dioxapentacyclo[10.6.1.02,10.04,9.015,19]nonadec-10-ene-7,14-dione
SMILES
C[C@]12CCC[C@]3([C@H]1[C@@H](C=C4[C@]3([C@H]([C@@]5([C@H]4OC(=O)CC5)C)O)O)OC2=O)C
InChI
InChI=1S/C20H26O6/c1-17-6-4-7-19(3)13(17)11(25-16(17)23)9-10-14-18(2,8-5-12(21)26-14)15(22)20(10,19)24/h9,11,13-15,22,24H,4-8H2,1-3H3/t11-,13+,14+,15+,17+,18+,19+,20-/m1/s1
InChIKey
JMAPMWNXFJANPJ-OTLMSYBKSA-N
Synonyms
Geniculol; CHEMBL452485
CAS NA
PubChem CID 10713668
ChEMBL ID CHEMBL452485
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Lactones
        • Subclass: Delta valerolactones
          • Direct Parent: Delta valerolactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 362.4 ALogp: 0.7
HBD: 2 HBA: 6
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 93.1 Aromatic Rings: 5
Heavy Atoms: 26 QED Weighted: 0.506

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.339 MDCK Permeability: 0.00001400
Pgp-inhibitor: 0.903 Pgp-substrate: 0.671
Human Intestinal Absorption (HIA): 0.016 20% Bioavailability (F20%): 0.283
30% Bioavailability (F30%): 0.625

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.748 Plasma Protein Binding (PPB): 50.88%
Volume Distribution (VD): 0.848 Fu: 41.34%

ADMET: Metabolism

CYP1A2-inhibitor: 0.023 CYP1A2-substrate: 0.777
CYP2C19-inhibitor: 0.026 CYP2C19-substrate: 0.584
CYP2C9-inhibitor: 0.033 CYP2C9-substrate: 0.032
CYP2D6-inhibitor: 0.003 CYP2D6-substrate: 0.077
CYP3A4-inhibitor: 0.895 CYP3A4-substrate: 0.33

ADMET: Excretion

Clearance (CL): 2.133 Half-life (T1/2): 0.529

ADMET: Toxicity

hERG Blockers: 0.032 Human Hepatotoxicity (H-HT): 0.695
Drug-inuced Liver Injury (DILI): 0.219 AMES Toxicity: 0.649
Rat Oral Acute Toxicity: 0.982 Maximum Recommended Daily Dose: 0.975
Skin Sensitization: 0.328 Carcinogencity: 0.308
Eye Corrosion: 0.006 Eye Irritation: 0.024
Respiratory Toxicity: 0.935
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003323 0.424 D04GJN 0.299
ENC003795 0.418 D0I2SD 0.299
ENC001928 0.411 D0Z4ZT 0.298
ENC002394 0.411 D0L2LS 0.295
ENC005203 0.411 D0Z1XD 0.294
ENC003257 0.408 D0Q4SD 0.292
ENC003679 0.398 D0Y2YP 0.292
ENC002829 0.369 D0EP0C 0.288
ENC005049 0.360 D0U3GL 0.282
ENC002007 0.354 D0KR5B 0.279
*Note: the compound similarity was calculated by RDKIT.