NPs Basic Information

Name
Chrodrimanin B
Molecular Formula C27H32O8
IUPAC Name*
[(1S,5R,6R,14R,15S,17R,22S)-10,15-dihydroxy-6,14,18,18,22-pentamethyl-8,19-dioxo-7,13-dioxapentacyclo[12.8.0.03,12.04,9.017,22]docosa-3(12),4(9),10,20-tetraen-5-yl] acetate
SMILES
C[C@@H]1[C@@H](C2=C(C(=CC3=C2C[C@H]4[C@]5(C=CC(=O)C([C@@H]5C[C@@H]([C@@]4(O3)C)O)(C)C)C)O)C(=O)O1)OC(=O)C
InChI
InChI=1S/C27H32O8/c1-12-23(34-13(2)28)21-14-9-18-26(5)8-7-19(30)25(3,4)17(26)11-20(31)27(18,6)35-16(14)10-15(29)22(21)24(32)33-12/h7-8,10,12,17-18,20,23,29,31H,9,11H2,1-6H3/t12-,17+,18+,20+,23+,26+,27-/m1/s1
InChIKey
DYQKBALSPZQWQD-FWEFFTEASA-N
Synonyms
Chrodrimanin B; 132196-54-4; (1R,2R,7aR,8S,9aR,13aS,13bS)-1-(acetyloxy)-1,8,9,9a,10,13a,13b,14-octahydro-5,8-dihydroxy-2,7a,10,10,13a-pentamethyl-2H,4H-benzo[a]pyrano[3,4-j]xanthene-4,11(7aH)-dione; [(1S,5R,6R,14R,15S,17R,22S)-10,15-dihydroxy-6,14,18,18,22-pentamethyl-8,19-dioxo-7,13-dioxapentacyclo[12.8.0.03,12.04,9.017,22]docosa-3(12),4(9),10,20-tetraen-5-yl] acetate; CHEMBL3581316; CHEBI:156420; HY-N8472; ZINC169649006; NCGC00385361-01; CS-0144645
CAS NA
PubChem CID 101565496
ChEMBL ID CHEMBL3581316
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Terpene lactones
          • Direct Parent: Diterpene lactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 484.5 ALogp: 3.8
HBD: 2 HBA: 8
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 119.0 Aromatic Rings: 5
Heavy Atoms: 35 QED Weighted: 0.57

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.296 MDCK Permeability: 0.00003100
Pgp-inhibitor: 0.973 Pgp-substrate: 0.028
Human Intestinal Absorption (HIA): 0.05 20% Bioavailability (F20%): 0.161
30% Bioavailability (F30%): 0.479

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.696 Plasma Protein Binding (PPB): 82.53%
Volume Distribution (VD): 0.959 Fu: 15.49%

ADMET: Metabolism

CYP1A2-inhibitor: 0.087 CYP1A2-substrate: 0.245
CYP2C19-inhibitor: 0.039 CYP2C19-substrate: 0.273
CYP2C9-inhibitor: 0.448 CYP2C9-substrate: 0.283
CYP2D6-inhibitor: 0.595 CYP2D6-substrate: 0.074
CYP3A4-inhibitor: 0.683 CYP3A4-substrate: 0.469

ADMET: Excretion

Clearance (CL): 3.543 Half-life (T1/2): 0.252

ADMET: Toxicity

hERG Blockers: 0.83 Human Hepatotoxicity (H-HT): 0.866
Drug-inuced Liver Injury (DILI): 0.249 AMES Toxicity: 0.041
Rat Oral Acute Toxicity: 0.95 Maximum Recommended Daily Dose: 0.975
Skin Sensitization: 0.345 Carcinogencity: 0.735
Eye Corrosion: 0.003 Eye Irritation: 0.011
Respiratory Toxicity: 0.961
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003164 0.800 D03ZZK 0.279
ENC002386 0.757 D09WYX 0.264
ENC001980 0.356 D01XDL 0.263
ENC003846 0.338 D01XWG 0.263
ENC005151 0.338 D02QJH 0.259
ENC003259 0.331 D0P0HT 0.258
ENC005020 0.329 D02JNM 0.257
ENC006083 0.322 D0F7NQ 0.257
ENC005318 0.319 D0D2TN 0.256
ENC005188 0.319 D0G7KJ 0.255
*Note: the compound similarity was calculated by RDKIT.