NPs Basic Information

Name
2-Hexylidene-3-methyl succinic acid 4-methyl ester
Molecular Formula C12H20O4
IUPAC Name*
2-(1-methoxy-1-oxopropan-2-yl)oct-2-enoic acid
SMILES
CCCCCC=C(C(C)C(=O)OC)C(=O)O
InChI
InChI=1S/C12H20O4/c1-4-5-6-7-8-10(11(13)14)9(2)12(15)16-3/h8-9H,4-7H2,1-3H3,(H,13,14)
InChIKey
VLKIBLGHVSBSQN-UHFFFAOYSA-N
Synonyms
2-hexylidene-3-methyl succinic acid 4-methyl ester
CAS NA
PubChem CID 73815902
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty acids and conjugate
          • Direct Parent: Medium-chain fatty acids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 228.28 ALogp: 3.0
HBD: 1 HBA: 4
Rotatable Bonds: 8 Lipinski's rule of five: Accepted
Polar Surface Area: 63.6 Aromatic Rings: 0
Heavy Atoms: 16 QED Weighted: 0.413

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.729 MDCK Permeability: 0.00044334
Pgp-inhibitor: 0 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.014 20% Bioavailability (F20%): 0.002
30% Bioavailability (F30%): 0.134

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.991 Plasma Protein Binding (PPB): 37.29%
Volume Distribution (VD): 0.418 Fu: 61.62%

ADMET: Metabolism

CYP1A2-inhibitor: 0.031 CYP1A2-substrate: 0.544
CYP2C19-inhibitor: 0.025 CYP2C19-substrate: 0.486
CYP2C9-inhibitor: 0.006 CYP2C9-substrate: 0.917
CYP2D6-inhibitor: 0.008 CYP2D6-substrate: 0.162
CYP3A4-inhibitor: 0.012 CYP3A4-substrate: 0.044

ADMET: Excretion

Clearance (CL): 8.362 Half-life (T1/2): 0.83

ADMET: Toxicity

hERG Blockers: 0.006 Human Hepatotoxicity (H-HT): 0.131
Drug-inuced Liver Injury (DILI): 0.059 AMES Toxicity: 0.004
Rat Oral Acute Toxicity: 0.026 Maximum Recommended Daily Dose: 0.012
Skin Sensitization: 0.573 Carcinogencity: 0.041
Eye Corrosion: 0.904 Eye Irritation: 0.953
Respiratory Toxicity: 0.097
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005324 0.723 D02GIU 0.296
ENC004866 0.723 D0AY9Q 0.273
ENC001885 0.723 D0ZI4H 0.260
ENC005933 0.648 D0Y3KG 0.259
ENC005934 0.623 D01QLH 0.255
ENC003534 0.508 D05PLH 0.254
ENC004920 0.473 D0H2YX 0.250
ENC000833 0.392 D0U5CE 0.241
ENC000726 0.392 D03LGG 0.241
ENC000235 0.375 D0I5HV 0.240
*Note: the compound similarity was calculated by RDKIT.