NPs Basic Information

Name
Smardaesidin C, (rel)-
Molecular Formula C20H30O4
IUPAC Name*
(1S,2S,5R,8S,10S,14R)-5-ethenyl-5,11,11-trimethyl-16-oxatetracyclo[6.6.2.01,10.02,7]hexadec-6-ene-2,8,14-triol
SMILES
C[C@@]1(CC[C@]2(C(=C1)[C@@]3(C[C@@H]4[C@]2(CO3)[C@@H](CCC4(C)C)O)O)O)C=C
InChI
InChI=1S/C20H30O4/c1-5-17(4)8-9-19(22)14(10-17)20(23)11-13-16(2,3)7-6-15(21)18(13,19)12-24-20/h5,10,13,15,21-23H,1,6-9,11-12H2,2-4H3/t13-,15+,17-,18+,19+,20-/m0/s1
InChIKey
FNUBWHKNLAHVEZ-UEKXCGIHSA-N
Synonyms
Smardaesidin C; Smardaesidin C, (rel)-; CHEBI:69489; Q27137827
CAS NA
PubChem CID 70698097
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Oxanes
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Oxanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 334.4 ALogp: 1.8
HBD: 3 HBA: 4
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 69.9 Aromatic Rings: 5
Heavy Atoms: 24 QED Weighted: 0.644

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.807 MDCK Permeability: 0.00002120
Pgp-inhibitor: 0.006 Pgp-substrate: 0.69
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.021
30% Bioavailability (F30%): 0.01

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.952 Plasma Protein Binding (PPB): 83.46%
Volume Distribution (VD): 1.496 Fu: 24.39%

ADMET: Metabolism

CYP1A2-inhibitor: 0.01 CYP1A2-substrate: 0.877
CYP2C19-inhibitor: 0.04 CYP2C19-substrate: 0.688
CYP2C9-inhibitor: 0.063 CYP2C9-substrate: 0.031
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.053
CYP3A4-inhibitor: 0.786 CYP3A4-substrate: 0.679

ADMET: Excretion

Clearance (CL): 3.106 Half-life (T1/2): 0.174

ADMET: Toxicity

hERG Blockers: 0.022 Human Hepatotoxicity (H-HT): 0.626
Drug-inuced Liver Injury (DILI): 0.029 AMES Toxicity: 0.009
Rat Oral Acute Toxicity: 0.361 Maximum Recommended Daily Dose: 0.989
Skin Sensitization: 0.222 Carcinogencity: 0.951
Eye Corrosion: 0.038 Eye Irritation: 0.268
Respiratory Toxicity: 0.99
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002830 0.536 D0L2LS 0.287
ENC002083 0.488 D0R7JT 0.255
ENC002041 0.433 D0H2MO 0.250
ENC002831 0.422 D0Z1XD 0.248
ENC002731 0.419 D0U3GL 0.248
ENC001409 0.396 D04VIS 0.243
ENC001070 0.395 D0KR5B 0.236
ENC002834 0.362 D0Q6NZ 0.236
ENC002832 0.361 D06IIB 0.231
ENC002833 0.355 D0P0HT 0.223
*Note: the compound similarity was calculated by RDKIT.