NPs Basic Information

Name
Sphaeropsidin A
Molecular Formula C20H26O5
IUPAC Name*
(1R,2R,5R,9S,10S)-5-ethenyl-2,9-dihydroxy-5,11,11-trimethyl-16-oxatetracyclo[7.5.2.01,10.02,7]hexadec-6-ene-8,15-dione
SMILES
C[C@@]1(CC[C@]2(C(=C1)C(=O)[C@@]3([C@@H]4[C@@]2(CCCC4(C)C)C(=O)O3)O)O)C=C
InChI
InChI=1S/C20H26O5/c1-5-17(4)9-10-19(23)12(11-17)13(21)20(24)14-16(2,3)7-6-8-18(14,19)15(22)25-20/h5,11,14,23-24H,1,6-10H2,2-4H3/t14-,17-,18-,19+,20+/m0/s1
InChIKey
FEKFUWWVNCCROX-SQWSIXGCSA-N
Synonyms
SPHAEROPSIDIN A; LL-S491beta; Sphaeropsidin A, (+)-; 9F59Q9OS1I; CHEBI:69494; (4aR,4bR,7R,10S,10aS)-7-Ethenyl-1,2,3,4,4b,5,6,7,10,10a-decahydro-4b,10-dihydroxy-1,1,7-trimethyl-9H-10,4a-(epoxymethano)phenanthrene-9,12-dione; 38991-80-9; 9H-10,4a-(Epoxymethano)phenanthrene-9,12-dione, 7-ethenyl-1,2,3,4,4b,5,6,7,10,10a-decahydro-4b,10-dihydroxy-1,1,7-trimethyl-, (4aR,4bR,7R,10S,10aS)-; Antibiotic LL-S491beta; UNII-9F59Q9OS1I; MLS003373242; CHEMBL1834675; ANTIBIOTIC LL-S491.BETA.; NSC765878; NSC-765878; SMR002047999; Q27137833; (2R,4aR,4bR,8aS,9S)-4a,9-dihydroxy-2,8,8-trimethyl-2-vinyl-4,4a,5,6,7,8,8a,9-octahydro-2H-9,4b-(epoxymethano)phenanthrene-10,12(3H)-dione
CAS 38991-80-9
PubChem CID 51361447
ChEMBL ID CHEMBL1834675
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Lactones
        • Subclass: Gamma butyrolactones
          • Direct Parent: Gamma butyrolactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 346.4 ALogp: 2.6
HBD: 2 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 83.8 Aromatic Rings: 4
Heavy Atoms: 25 QED Weighted: 0.563

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.919 MDCK Permeability: 0.00002150
Pgp-inhibitor: 0.994 Pgp-substrate: 0
Human Intestinal Absorption (HIA): 0.034 20% Bioavailability (F20%): 0.064
30% Bioavailability (F30%): 0.007

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.954 Plasma Protein Binding (PPB): 83.78%
Volume Distribution (VD): 1.605 Fu: 14.94%

ADMET: Metabolism

CYP1A2-inhibitor: 0.013 CYP1A2-substrate: 0.954
CYP2C19-inhibitor: 0.22 CYP2C19-substrate: 0.732
CYP2C9-inhibitor: 0.191 CYP2C9-substrate: 0.059
CYP2D6-inhibitor: 0.016 CYP2D6-substrate: 0.083
CYP3A4-inhibitor: 0.823 CYP3A4-substrate: 0.841

ADMET: Excretion

Clearance (CL): 2.882 Half-life (T1/2): 0.162

ADMET: Toxicity

hERG Blockers: 0.023 Human Hepatotoxicity (H-HT): 0.456
Drug-inuced Liver Injury (DILI): 0.04 AMES Toxicity: 0.783
Rat Oral Acute Toxicity: 0.254 Maximum Recommended Daily Dose: 0.666
Skin Sensitization: 0.179 Carcinogencity: 0.631
Eye Corrosion: 0.012 Eye Irritation: 0.217
Respiratory Toxicity: 0.899
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001409 0.722 D0G6AB 0.252
ENC002041 0.541 D04GJN 0.250
ENC002830 0.456 D0L2LS 0.245
ENC002906 0.419 D0Z1XD 0.243
ENC002831 0.413 D0EP0C 0.233
ENC002829 0.412 D06AEO 0.232
ENC002832 0.411 D0IX6I 0.232
ENC002833 0.376 D0Q6NZ 0.231
ENC002083 0.368 D0Q4SD 0.228
ENC001070 0.356 D0I2SD 0.227
*Note: the compound similarity was calculated by RDKIT.