NPs Basic Information

Name
(1R,3aS,9aR)-1,8-dihydroxy-2,3,3a,9a-tetrahydro-1H-cyclopenta[b]chromen-9-one
Molecular Formula C12H12O4
IUPAC Name*
(1R,3aS,9aR)-1,8-dihydroxy-2,3,3a,9a-tetrahydro-1H-cyclopenta[b]chromen-9-one
SMILES
C1C[C@H]2[C@@H]([C@@H]1O)C(=O)C3=C(C=CC=C3O2)O
InChI
InChI=1S/C12H12O4/c13-6-2-1-3-8-10(6)12(15)11-7(14)4-5-9(11)16-8/h1-3,7,9,11,13-14H,4-5H2/t7-,9+,11-/m1/s1
InChIKey
YKORDYACRRUFHJ-POZPLHJXSA-N
Synonyms
Diaportheone B
CAS NA
PubChem CID 60166720
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Chromones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 220.22 ALogp: 1.5
HBD: 2 HBA: 4
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 66.8 Aromatic Rings: 3
Heavy Atoms: 16 QED Weighted: 0.696

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.886 MDCK Permeability: 0.00001390
Pgp-inhibitor: 0.006 Pgp-substrate: 0.003
Human Intestinal Absorption (HIA): 0.009 20% Bioavailability (F20%): 0.004
30% Bioavailability (F30%): 0.157

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.423 Plasma Protein Binding (PPB): 78.54%
Volume Distribution (VD): 0.976 Fu: 20.53%

ADMET: Metabolism

CYP1A2-inhibitor: 0.631 CYP1A2-substrate: 0.226
CYP2C19-inhibitor: 0.139 CYP2C19-substrate: 0.586
CYP2C9-inhibitor: 0.078 CYP2C9-substrate: 0.868
CYP2D6-inhibitor: 0.544 CYP2D6-substrate: 0.446
CYP3A4-inhibitor: 0.311 CYP3A4-substrate: 0.216

ADMET: Excretion

Clearance (CL): 9.15 Half-life (T1/2): 0.397

ADMET: Toxicity

hERG Blockers: 0.052 Human Hepatotoxicity (H-HT): 0.188
Drug-inuced Liver Injury (DILI): 0.528 AMES Toxicity: 0.311
Rat Oral Acute Toxicity: 0.357 Maximum Recommended Daily Dose: 0.047
Skin Sensitization: 0.549 Carcinogencity: 0.664
Eye Corrosion: 0.033 Eye Irritation: 0.741
Respiratory Toxicity: 0.467
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002796 0.566 D0S0LZ 0.252
ENC002975 0.473 D04JHN 0.250
ENC005856 0.473 D0WE3O 0.250
ENC002252 0.446 D0PG8O 0.247
ENC005395 0.446 D07MGA 0.247
ENC005241 0.446 D00ZFP 0.244
ENC002649 0.446 D07HBX 0.241
ENC002027 0.446 D0T6RC 0.241
ENC004791 0.446 D08NQZ 0.240
ENC004790 0.431 D0H1AR 0.240
*Note: the compound similarity was calculated by RDKIT.