NPs Basic Information

Name
(-)-Gynuraone
Molecular Formula C10H10O4
IUPAC Name*
(2R,3R)-3,5-dihydroxy-2-methyl-2,3-dihydrochromen-4-one
SMILES
C[C@@H]1[C@H](C(=O)C2=C(C=CC=C2O1)O)O
InChI
InChI=1S/C10H10O4/c1-5-9(12)10(13)8-6(11)3-2-4-7(8)14-5/h2-5,9,11-12H,1H3/t5-,9-/m1/s1
InChIKey
COBAEYCUCRUGRP-MLUIRONXSA-N
Synonyms
(-)-Gynuraone; CHEBI:68289; CHEMBL1765413; Q27136785; (2R,3R)-3,5-dihydroxy-2-methyl-2,3-dihydro-4H-chromen-4-one
CAS NA
PubChem CID 54582272
ChEMBL ID CHEMBL1765413
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Chromones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 194.18 ALogp: 1.5
HBD: 2 HBA: 4
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 66.8 Aromatic Rings: 2
Heavy Atoms: 14 QED Weighted: 0.649

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.91 MDCK Permeability: 0.00001260
Pgp-inhibitor: 0.003 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.018

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.867 Plasma Protein Binding (PPB): 79.64%
Volume Distribution (VD): 0.789 Fu: 16.44%

ADMET: Metabolism

CYP1A2-inhibitor: 0.731 CYP1A2-substrate: 0.619
CYP2C19-inhibitor: 0.104 CYP2C19-substrate: 0.45
CYP2C9-inhibitor: 0.049 CYP2C9-substrate: 0.73
CYP2D6-inhibitor: 0.673 CYP2D6-substrate: 0.576
CYP3A4-inhibitor: 0.094 CYP3A4-substrate: 0.192

ADMET: Excretion

Clearance (CL): 7.765 Half-life (T1/2): 0.453

ADMET: Toxicity

hERG Blockers: 0.01 Human Hepatotoxicity (H-HT): 0.079
Drug-inuced Liver Injury (DILI): 0.854 AMES Toxicity: 0.229
Rat Oral Acute Toxicity: 0.174 Maximum Recommended Daily Dose: 0.013
Skin Sensitization: 0.135 Carcinogencity: 0.735
Eye Corrosion: 0.004 Eye Irritation: 0.393
Respiratory Toxicity: 0.366
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005566 0.652 D07HBX 0.275
ENC003003 0.652 D0S0LZ 0.271
ENC002022 0.652 D07MGA 0.269
ENC002629 0.652 D0H1AR 0.258
ENC001992 0.652 D0J2NK 0.253
ENC003296 0.652 D0AZ8C 0.248
ENC005565 0.652 D08NQZ 0.245
ENC002975 0.574 D01WJL 0.241
ENC005856 0.574 D0C4YC 0.241
ENC002885 0.566 D0WE3O 0.241
*Note: the compound similarity was calculated by RDKIT.