NPs Basic Information

Name
Phomotenone
Molecular Formula C11H18O2
IUPAC Name*
(4R)-3-[(1S)-1-hydroxybutyl]-2,4-dimethylcyclopent-2-en-1-one
SMILES
CCC[C@@H](C1=C(C(=O)C[C@H]1C)C)O
InChI
InChI=1S/C11H18O2/c1-4-5-9(12)11-7(2)6-10(13)8(11)3/h7,9,12H,4-6H2,1-3H3/t7-,9+/m1/s1
InChIKey
NMGKVGASSWZGPX-APPZFPTMSA-N
Synonyms
Phomotenone
CAS NA
PubChem CID 52953427
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Alcohols and polyols
          • Direct Parent: Secondary alcohols

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 182.26 ALogp: 1.2
HBD: 1 HBA: 2
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 37.3 Aromatic Rings: 1
Heavy Atoms: 13 QED Weighted: 0.728

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.421 MDCK Permeability: 0.00002460
Pgp-inhibitor: 0.011 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.009 20% Bioavailability (F20%): 0.022
30% Bioavailability (F30%): 0.006

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.963 Plasma Protein Binding (PPB): 67.44%
Volume Distribution (VD): 0.695 Fu: 34.16%

ADMET: Metabolism

CYP1A2-inhibitor: 0.079 CYP1A2-substrate: 0.72
CYP2C19-inhibitor: 0.041 CYP2C19-substrate: 0.921
CYP2C9-inhibitor: 0.029 CYP2C9-substrate: 0.563
CYP2D6-inhibitor: 0.004 CYP2D6-substrate: 0.629
CYP3A4-inhibitor: 0.063 CYP3A4-substrate: 0.369

ADMET: Excretion

Clearance (CL): 15.987 Half-life (T1/2): 0.901

ADMET: Toxicity

hERG Blockers: 0.009 Human Hepatotoxicity (H-HT): 0.343
Drug-inuced Liver Injury (DILI): 0.368 AMES Toxicity: 0.011
Rat Oral Acute Toxicity: 0.568 Maximum Recommended Daily Dose: 0.034
Skin Sensitization: 0.055 Carcinogencity: 0.168
Eye Corrosion: 0.465 Eye Irritation: 0.734
Respiratory Toxicity: 0.03
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004903 0.478 D05OQJ 0.259
ENC003474 0.305 D0F0YZ 0.246
ENC005858 0.305 D00MYT 0.246
ENC005501 0.305 D0Y3KG 0.224
ENC005201 0.305 D00SJE 0.215
ENC005632 0.295 D06NSA 0.215
ENC000980 0.293 D0CT4D 0.213
ENC005857 0.293 D0R6BR 0.206
ENC005500 0.283 D0A4JK 0.197
ENC002922 0.281 D00IUG 0.195
*Note: the compound similarity was calculated by RDKIT.