NPs Basic Information

Name
(6S, 1′S, 2′R)-LL-P880β
Molecular Formula C11H18O5
IUPAC Name*
2-(1,2-dihydroxypentyl)-4-methoxy-2,3-dihydropyran-6-one
SMILES
CCCC(O)C(O)C1CC(OC)=CC(=O)O1
InChI
InChI=1S/C11H18O5/c1-3-4-8(12)11(14)9-5-7(15-2)6-10(13)16-9/h6,8-9,11-12,14H,3-5H2,1-2H3/t8-,9+,11+/m1/s1
InChIKey
YLHOHANRUSKHKO-YWVKMMECSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Dihydropyranones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 230.26 ALogp: 0.4
HBD: 2 HBA: 5
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 76.0 Aromatic Rings: 1
Heavy Atoms: 16 QED Weighted: 0.682

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.607 MDCK Permeability: 0.00022598
Pgp-inhibitor: 0.001 Pgp-substrate: 0.119
Human Intestinal Absorption (HIA): 0.858 20% Bioavailability (F20%): 0.01
30% Bioavailability (F30%): 0.916

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.776 Plasma Protein Binding (PPB): 20.47%
Volume Distribution (VD): 0.573 Fu: 58.69%

ADMET: Metabolism

CYP1A2-inhibitor: 0.028 CYP1A2-substrate: 0.145
CYP2C19-inhibitor: 0.021 CYP2C19-substrate: 0.828
CYP2C9-inhibitor: 0.006 CYP2C9-substrate: 0.454
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.333
CYP3A4-inhibitor: 0.018 CYP3A4-substrate: 0.249

ADMET: Excretion

Clearance (CL): 8.588 Half-life (T1/2): 0.872

ADMET: Toxicity

hERG Blockers: 0.027 Human Hepatotoxicity (H-HT): 0.282
Drug-inuced Liver Injury (DILI): 0.342 AMES Toxicity: 0.018
Rat Oral Acute Toxicity: 0.086 Maximum Recommended Daily Dose: 0.632
Skin Sensitization: 0.901 Carcinogencity: 0.15
Eye Corrosion: 0.016 Eye Irritation: 0.241
Respiratory Toxicity: 0.393
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D0L1WV 0.296
D0ZI4H 0.196
D07AHW 0.194
D0Y3KG 0.190
D09SSC 0.189
D0Q9YT 0.187
D04YPN 0.186
D0CT4D 0.186
D00NPP 0.184
D0S2IQ 0.182
*Note: the compound similarity was calculated by RDKIT.