NPs Basic Information

Name
Variecolorin O
Molecular Formula C19H21N3O3
IUPAC Name*
(6Z)-3-hydroxy-3-methyl-6-[[2-(2-methylbut-3-en-2-yl)-1H-indol-3-yl]methylidene]piperazine-2,5-dione
SMILES
CC1(C(=O)N/C(=C\C2=C(NC3=CC=CC=C32)C(C)(C)C=C)/C(=O)N1)O
InChI
InChI=1S/C19H21N3O3/c1-5-18(2,3)15-12(11-8-6-7-9-13(11)20-15)10-14-16(23)22-19(4,25)17(24)21-14/h5-10,20,25H,1H2,2-4H3,(H,21,24)(H,22,23)/b14-10-
InChIKey
KXDOFLWMYBNRGX-UVTDQMKNSA-N
Synonyms
Variecolorin O
CAS NA
PubChem CID 49831794
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Amino acids, peptides, an
          • Direct Parent: Alpha amino acids and der

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 339.4 ALogp: 2.6
HBD: 4 HBA: 3
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 94.2 Aromatic Rings: 3
Heavy Atoms: 25 QED Weighted: 0.511

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.802 MDCK Permeability: 0.00002430
Pgp-inhibitor: 0.791 Pgp-substrate: 0.008
Human Intestinal Absorption (HIA): 0.023 20% Bioavailability (F20%): 0.015
30% Bioavailability (F30%): 0.003

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.957 Plasma Protein Binding (PPB): 91.80%
Volume Distribution (VD): 0.754 Fu: 3.55%

ADMET: Metabolism

CYP1A2-inhibitor: 0.191 CYP1A2-substrate: 0.712
CYP2C19-inhibitor: 0.449 CYP2C19-substrate: 0.787
CYP2C9-inhibitor: 0.183 CYP2C9-substrate: 0.879
CYP2D6-inhibitor: 0.037 CYP2D6-substrate: 0.243
CYP3A4-inhibitor: 0.701 CYP3A4-substrate: 0.915

ADMET: Excretion

Clearance (CL): 1.893 Half-life (T1/2): 0.701

ADMET: Toxicity

hERG Blockers: 0.017 Human Hepatotoxicity (H-HT): 0.18
Drug-inuced Liver Injury (DILI): 0.953 AMES Toxicity: 0.015
Rat Oral Acute Toxicity: 0.889 Maximum Recommended Daily Dose: 0.054
Skin Sensitization: 0.155 Carcinogencity: 0.042
Eye Corrosion: 0.003 Eye Irritation: 0.008
Respiratory Toxicity: 0.974
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002459 0.805 D01PZD 0.308
ENC001957 0.718 D0W7WC 0.281
ENC005569 0.718 D0Y7RW 0.264
ENC002895 0.691 D08UMH 0.258
ENC002714 0.663 D07RGW 0.244
ENC004441 0.648 D0E3SH 0.243
ENC004440 0.648 D09NIA 0.243
ENC004926 0.644 D0E4DW 0.242
ENC004927 0.629 D0Z9NZ 0.242
ENC002715 0.622 D0U5RT 0.242
*Note: the compound similarity was calculated by RDKIT.