NPs Basic Information

Name
(3R),(5R)-5-hydroxy-de-O-methyllasiodiplodin
Molecular Formula C16H22O5
IUPAC Name*
(4R,6R)-6,14,16-trihydroxy-4-methyl-3-oxabicyclo[10.4.0]hexadeca-1(12),13,15-trien-2-one
SMILES
C[C@@H]1C[C@@H](CCCCCC2=C(C(=CC(=C2)O)O)C(=O)O1)O
InChI
InChI=1S/C16H22O5/c1-10-7-12(17)6-4-2-3-5-11-8-13(18)9-14(19)15(11)16(20)21-10/h8-10,12,17-19H,2-7H2,1H3/t10-,12-/m1/s1
InChIKey
PQJJJIPGQCKGDU-ZYHUDNBSSA-N
Synonyms
(3R),(5R)-5- hydroxy-de-O-methyllasiodiplodin; (3R)-3alpha-Methyl-5alpha,12,14-trihydroxy-3,4,5,6,7,8,9,10-octahydro-1H-2-benzooxacyclododecin-1-one
CAS NA
PubChem CID 46896124
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Macrolides and analogues
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Macrolides and analogues

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 294.34 ALogp: 3.6
HBD: 3 HBA: 5
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 87.0 Aromatic Rings: 2
Heavy Atoms: 21 QED Weighted: 0.639

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.849 MDCK Permeability: 0.00002150
Pgp-inhibitor: 0.001 Pgp-substrate: 0.155
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.848
30% Bioavailability (F30%): 0.993

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.617 Plasma Protein Binding (PPB): 92.20%
Volume Distribution (VD): 1.93 Fu: 10.61%

ADMET: Metabolism

CYP1A2-inhibitor: 0.964 CYP1A2-substrate: 0.183
CYP2C19-inhibitor: 0.753 CYP2C19-substrate: 0.081
CYP2C9-inhibitor: 0.731 CYP2C9-substrate: 0.958
CYP2D6-inhibitor: 0.869 CYP2D6-substrate: 0.228
CYP3A4-inhibitor: 0.527 CYP3A4-substrate: 0.089

ADMET: Excretion

Clearance (CL): 12.865 Half-life (T1/2): 0.791

ADMET: Toxicity

hERG Blockers: 0.029 Human Hepatotoxicity (H-HT): 0.15
Drug-inuced Liver Injury (DILI): 0.461 AMES Toxicity: 0.035
Rat Oral Acute Toxicity: 0.039 Maximum Recommended Daily Dose: 0.974
Skin Sensitization: 0.89 Carcinogencity: 0.166
Eye Corrosion: 0.053 Eye Irritation: 0.96
Respiratory Toxicity: 0.496
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003158 0.813 D07GRH 0.299
ENC005006 0.776 D0P6VV 0.298
ENC003870 0.758 D07MGA 0.293
ENC003244 0.758 D00ZFP 0.278
ENC005003 0.754 D0Z1FX 0.272
ENC002297 0.754 D04JHN 0.269
ENC001527 0.690 D08QMX 0.264
ENC003871 0.681 D02NSF 0.263
ENC005002 0.657 D03DXN 0.263
ENC003872 0.634 D03YVO 0.257
*Note: the compound similarity was calculated by RDKIT.