NPs Basic Information

Name
(+)-Rugulosin
Molecular Formula C30H22O10
IUPAC Name*
(1R,2S,13R,14S,15R,16R,17S,28S)-8,10,14,23,25,28-hexahydroxy-6,21-dimethyloctacyclo[14.11.1.02,11.02,15.04,9.013,17.017,26.019,24]octacosa-4(9),5,7,10,19(24),20,22,25-octaene-3,12,18,27-tetrone
SMILES
CC1=CC2=C(C(=C1)O)C(=C3C(=O)[C@H]4[C@H]([C@H]5[C@]3(C2=O)[C@@H]6[C@H]([C@H]5[C@@]47C(=C(C8=C(C7=O)C=C(C=C8O)C)O)C6=O)O)O)O
InChI
InChI=1S/C30H22O10/c1-7-3-9-13(11(31)5-7)21(33)17-25(37)20-23(35)15-16-24(36)19(29(15,17)27(9)39)26(38)18-22(34)14-10(28(40)30(16,18)20)4-8(2)6-12(14)32/h3-6,15-16,19-20,23-24,31-36H,1-2H3/t15-,16-,19+,20+,23-,24-,29+,30+/m0/s1
InChIKey
QFDPVUTXKUGISP-PUTAFCBNSA-N
Synonyms
Rugulosin A; (+)-Rugulosin; RUGULOSIN; Radicalisin; 23537-16-8; 7020AB775D; NSC 160880; (1R,2S,13R,14S,15R,16R,17S,28S)-8,10,14,23,25,28-Hexahydroxy-6,21-dimethyloctacyclo[14.11.1.02,11.02,15.04,9.013,17.017,26.019,24]octacosa-4(9),5,7,10,19(24),20,22,25-octaene-3,12,18,27-tetrone; (+)-Rugulosin (VAN); CCRIS 4402; NSC-160880; NSC-249990; NSC 249990; RUGULOSIN [IARC]; UNII-7020AB775D; DTXSID40891838; 5H,6H-6,13a,5a,14-(1,2,3,4)Butanetetraylcycloocta(1,2-b:5,6-b')dinaphthalene-5,8,13,16(14H)-tetrone, 1,7,9,15,17,20-hexahydroxy-3,11-dimethyl-, (5aS,6R,13aS,14R,17S,18R,19R,20S)-; 5H,6H-6,13a,5a,14-(1,2,3,4)Butanetetraylcycloocta(1,2-b:5,6-b')dinaphthalene-5,8,13,16(14H)-tetrone, 1,7,9,15,17,20-hexahydroxy-3,11-dimethyl-, (5aS-(5aR*,6S*,13aR*,14S*,17R*,18S*,19S*,20R*))-; HY-129806; 5H,6H-6,13a,5a,14-(1,2,3,4)Butanetetraylcycloocta(1,2-b:5,6-b')dinaphthalene-5,8,13,16(14H)-tetrone, 1,7,9,15,17,20-hexahydroxy-3,11-dimethyl- (VAN); 5H,6H-6,13A,5A,14-(1,2,3,4-BUTANETETRAYLCYCLOOCTA(1,2-B:5,6-B')DINAPHTHALENE-5,8,13,16(14H)-TETRONE, 1,7,9,15,17,20-HEXAHYDROXY-3,11-DIMETHYL-, (5AS,6R,13AS,14R,17S,18R,19R,20S)-
CAS 23537-16-8
PubChem CID 24776464
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Naphthalenes
        • Subclass: Naphthols and derivatives
          • Direct Parent: Naphthols and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 542.5 ALogp: 1.0
HBD: 6 HBA: 10
Rotatable Bonds: 0 Lipinski's rule of five: Rejected
Polar Surface Area: 190.0 Aromatic Rings: 8
Heavy Atoms: 40 QED Weighted: 0.288

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -6.152 MDCK Permeability: 0.00000838
Pgp-inhibitor: 0.006 Pgp-substrate: 0.989
Human Intestinal Absorption (HIA): 0.047 20% Bioavailability (F20%): 0.001
30% Bioavailability (F30%): 0.001

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.012 Plasma Protein Binding (PPB): 85.12%
Volume Distribution (VD): 1.53 Fu: 5.52%

ADMET: Metabolism

CYP1A2-inhibitor: 0.036 CYP1A2-substrate: 0.858
CYP2C19-inhibitor: 0.035 CYP2C19-substrate: 0.062
CYP2C9-inhibitor: 0.06 CYP2C9-substrate: 0.086
CYP2D6-inhibitor: 0.044 CYP2D6-substrate: 0.149
CYP3A4-inhibitor: 0.448 CYP3A4-substrate: 0.148

ADMET: Excretion

Clearance (CL): 6.224 Half-life (T1/2): 0.013

ADMET: Toxicity

hERG Blockers: 0.297 Human Hepatotoxicity (H-HT): 0.132
Drug-inuced Liver Injury (DILI): 0.906 AMES Toxicity: 0.041
Rat Oral Acute Toxicity: 0.889 Maximum Recommended Daily Dose: 0.148
Skin Sensitization: 0.446 Carcinogencity: 0.011
Eye Corrosion: 0.041 Eye Irritation: 0.021
Respiratory Toxicity: 0.876
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004265 0.790 D0J2NK 0.293
ENC004266 0.597 D0H1AR 0.289
ENC006102 0.439 D07JHH 0.276
ENC002421 0.420 D0S0LZ 0.272
ENC006027 0.403 D0FX2Q 0.249
ENC002945 0.358 D0R9WP 0.247
ENC003207 0.353 D0Z2LG 0.241
ENC000094 0.350 D09LBS 0.241
ENC000911 0.341 D0AZ8C 0.241
ENC000947 0.341 D08NQZ 0.239
*Note: the compound similarity was calculated by RDKIT.