NPs Basic Information

Name
2-(Hydroxymethyl)-3-methylcyclopent-2-en-1-one
Molecular Formula C7H10O2
IUPAC Name*
2-(hydroxymethyl)-3-methylcyclopent-2-en-1-one
SMILES
CC1=C(C(=O)CC1)CO
InChI
InChI=1S/C7H10O2/c1-5-2-3-7(9)6(5)4-8/h8H,2-4H2,1H3
InChIKey
VBOYONXEJMSAAT-UHFFFAOYSA-N
Synonyms
148694-03-5; 2-(Hydroxymethyl)-3-methylcyclopent-2-en-1-one; 2-(hydroxymethyl)-3-methyl-2-cyclopenten-1-one; CHEMBL458459; SCHEMBL5086158; DTXSID10578144; 2-Hydroxymethyl-3-methylcyclopent-2-enon; 2-hydroxymethyl-3-methylcyclopent-2-enone; 2-Hydroxymethyl-3-methyl-2-cyclopentene-1-one; 2-(hydroxymethyl)-3-methyl-2-cyclopentene-1-one
CAS 148694-03-5
PubChem CID 15768146
ChEMBL ID CHEMBL458459
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbonyl compounds
          • Direct Parent: Cyclic ketones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 126.15 ALogp: 0.1
HBD: 1 HBA: 2
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 37.3 Aromatic Rings: 1
Heavy Atoms: 9 QED Weighted: 0.57

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.406 MDCK Permeability: 0.00002110
Pgp-inhibitor: 0.007 Pgp-substrate: 0.035
Human Intestinal Absorption (HIA): 0.014 20% Bioavailability (F20%): 0.002
30% Bioavailability (F30%): 0.002

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.964 Plasma Protein Binding (PPB): 40.53%
Volume Distribution (VD): 0.554 Fu: 68.79%

ADMET: Metabolism

CYP1A2-inhibitor: 0.15 CYP1A2-substrate: 0.214
CYP2C19-inhibitor: 0.04 CYP2C19-substrate: 0.544
CYP2C9-inhibitor: 0.007 CYP2C9-substrate: 0.19
CYP2D6-inhibitor: 0.021 CYP2D6-substrate: 0.348
CYP3A4-inhibitor: 0.008 CYP3A4-substrate: 0.263

ADMET: Excretion

Clearance (CL): 6.188 Half-life (T1/2): 0.863

ADMET: Toxicity

hERG Blockers: 0.013 Human Hepatotoxicity (H-HT): 0.041
Drug-inuced Liver Injury (DILI): 0.166 AMES Toxicity: 0.534
Rat Oral Acute Toxicity: 0.319 Maximum Recommended Daily Dose: 0.171
Skin Sensitization: 0.778 Carcinogencity: 0.589
Eye Corrosion: 0.698 Eye Irritation: 0.991
Respiratory Toxicity: 0.406
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001459 0.500 D0YH0N 0.212
ENC000476 0.500 D0Z8AA 0.200
ENC004598 0.457 D0N0OU 0.190
ENC005910 0.341 D00IUG 0.188
ENC001840 0.326 D07MUN 0.188
ENC005199 0.306 D0CL9S 0.186
ENC001746 0.273 D0Z8SF 0.186
ENC002848 0.268 D0P4MT 0.179
ENC004509 0.265 D07GRH 0.179
ENC005292 0.264 D00EEL 0.178
*Note: the compound similarity was calculated by RDKIT.