NPs Basic Information

Name
Zelkovamycin
Molecular Formula C36H45N9O9S
IUPAC Name*
(16Z)-7-acetyl-13-ethyl-16-ethylidene-4-[(7-methoxy-1H-indol-3-yl)methyl]-7,18,22-trimethyl-24-thia-3,6,9,12,15,18,21,26-octazabicyclo[21.2.1]hexacosa-1(25),23(26)-diene-2,5,8,11,14,17,20-heptone
SMILES
CCC1C(=O)N/C(=C\C)/C(=O)N(CC(=O)NC(C2=NC(=CS2)C(=O)NC(C(=O)NC(C(=O)NCC(=O)N1)(C)C(=O)C)CC3=CNC4=C3C=CC=C4OC)C)C
InChI
InChI=1S/C36H45N9O9S/c1-8-22-30(49)41-23(9-2)34(52)45(6)16-28(48)39-18(3)33-43-25(17-55-33)31(50)42-24(13-20-14-37-29-21(20)11-10-12-26(29)54-7)32(51)44-36(5,19(4)46)35(53)38-15-27(47)40-22/h9-12,14,17-18,22,24,37H,8,13,15-16H2,1-7H3,(H,38,53)(H,39,48)(H,40,47)(H,41,49)(H,42,50)(H,44,51)/b23-9-
InChIKey
VYMRECQGDKKGCJ-AQHIEDMUSA-N
Synonyms
Zelkovamycin; 221197-33-7; (12Z,16Z)-7-acetyl-13-ethyl-16-ethylidene-4-((7-methoxy-1H-indol-3-yl)methyl)-7,18,22-trimethyl-3,6,9,12,15,18,21-heptaaza-1(2,4)-thiazolacyclodocosaphane-2,5,8,11,14,17,20-heptaone; Zelcovamycin; (16Z)-7-acetyl-13-ethyl-16-ethylidene-4-[(7-methoxy-1H-indol-3-yl)methyl]-7,18,22-trimethyl-24-thia-3,6,9,12,15,18,21,26-octazabicyclo[21.2.1]hexacosa-1(25),23(26)-diene-2,5,8,11,14,17,20-heptone
CAS NA
PubChem CID 10395445
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Amino acids, peptides, an
          • Direct Parent: Oligopeptides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 779.9 ALogp: 0.9
HBD: 7 HBA: 11
Rotatable Bonds: 5 Lipinski's rule of five: Rejected
Polar Surface Area: 278.0 Aromatic Rings: 4
Heavy Atoms: 55 QED Weighted: 0.14

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.793 MDCK Permeability: 0.00000359
Pgp-inhibitor: 0.76 Pgp-substrate: 1
Human Intestinal Absorption (HIA): 0.853 20% Bioavailability (F20%): 0.955
30% Bioavailability (F30%): 0.991

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.066 Plasma Protein Binding (PPB): 75.36%
Volume Distribution (VD): 0.228 Fu: 38.60%

ADMET: Metabolism

CYP1A2-inhibitor: 0.001 CYP1A2-substrate: 0.112
CYP2C19-inhibitor: 0.134 CYP2C19-substrate: 0.049
CYP2C9-inhibitor: 0.303 CYP2C9-substrate: 0.442
CYP2D6-inhibitor: 0 CYP2D6-substrate: 0.113
CYP3A4-inhibitor: 0.261 CYP3A4-substrate: 0.45

ADMET: Excretion

Clearance (CL): 2.481 Half-life (T1/2): 0.721

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.687
Drug-inuced Liver Injury (DILI): 0.822 AMES Toxicity: 0.006
Rat Oral Acute Toxicity: 0.674 Maximum Recommended Daily Dose: 0.486
Skin Sensitization: 0.063 Carcinogencity: 0.008
Eye Corrosion: 0.003 Eye Irritation: 0.002
Respiratory Toxicity: 0.028
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004435 0.825 D09ZIO 0.298
ENC004434 0.822 D0X9PF 0.256
ENC004432 0.819 D0M2YE 0.237
ENC004433 0.702 D0L7LC 0.234
ENC005139 0.341 D07DSQ 0.233
ENC005343 0.317 D00TLP 0.229
ENC001987 0.307 D02XIY 0.229
ENC002515 0.297 D0E2OU 0.220
ENC005563 0.295 D0D8XY 0.213
ENC005276 0.294 D07ESC 0.209
*Note: the compound similarity was calculated by RDKIT.