NPs Basic Information

Name
acuminatum D
Molecular Formula C41H65N7O10
IUPAC Name*
3-[3-butan-2-yl-22-decan-2-yl-6-[(4-hydroxyphenyl)methyl]-12,15-dimethyl-2,5,8,11,14,17,20-heptaoxo-1-oxa-4,7,10,13,16,19-hexazacyclodocos-9-yl]propanamide
SMILES
CCCCCCCCC(C)C1CC(=O)NCC(=O)NC(C)C(=O)NC(C)C(=O)NC(CCC(N)=O)C(=O)NC(Cc2ccc(O)cc2)C(=O)NC(C(C)CC)C(=O)O1
InChI
InChI=1S/C41H65N7O10/c1-7-9-10-11-12-13-14-25(4)32-22-34(51)43-23-35(52)44-26(5)37(53)45-27(6)38(54)46-30(19-20-33(42)50)39(55)47-31(21-28-15-17-29(49)18-16-28)40(56)48-36(24(3)8-2)41(57)58-32/h15-18,24-27,30-32,36,49H,7-14,19-23H2,1-6H3,(H2,42,50)(H,43,51)(H,44,52)(H,45,53)(H,46,54)(H,47,55)(H,48,56)/t24-,25+,26-,27+,30-,31+,32-,36-/m0/s1
InChIKey
HNBJBGLBRFZKFQ-FGIQGMPMSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Peptidomimetics
        • Subclass: Depsipeptides
          • Direct Parent: Cyclic depsipeptides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 816.01 ALogp: 1.5
HBD: 8 HBA: 10
Rotatable Bonds: 15 Lipinski's rule of five: Rejected
Polar Surface Area: 264.2 Aromatic Rings: 2
Heavy Atoms: 58 QED Weighted: 0.094

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.67 MDCK Permeability: 0.00005830
Pgp-inhibitor: 0.997 Pgp-substrate: 0.975
Human Intestinal Absorption (HIA): 0.521 20% Bioavailability (F20%): 0.882
30% Bioavailability (F30%): 0.996

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.007 Plasma Protein Binding (PPB): 87.37%
Volume Distribution (VD): 0.358 Fu: 4.29%

ADMET: Metabolism

CYP1A2-inhibitor: 0 CYP1A2-substrate: 0.021
CYP2C19-inhibitor: 0.07 CYP2C19-substrate: 0.044
CYP2C9-inhibitor: 0.268 CYP2C9-substrate: 0.034
CYP2D6-inhibitor: 0.001 CYP2D6-substrate: 0.046
CYP3A4-inhibitor: 0.801 CYP3A4-substrate: 0.065

ADMET: Excretion

Clearance (CL): 3.005 Half-life (T1/2): 0.566

ADMET: Toxicity

hERG Blockers: 0.012 Human Hepatotoxicity (H-HT): 0.665
Drug-inuced Liver Injury (DILI): 0.019 AMES Toxicity: 0.004
Rat Oral Acute Toxicity: 0.607 Maximum Recommended Daily Dose: 0.027
Skin Sensitization: 0.034 Carcinogencity: 0.006
Eye Corrosion: 0.003 Eye Irritation: 0.003
Respiratory Toxicity: 0.002
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005271 0.837 D0M3FJ 0.420
ENC005275 0.781 D08FJL 0.402
ENC003950 0.766 D02SBQ 0.389
ENC005273 0.750 D0D8XY 0.382
ENC005272 0.733 D09PZZ 0.364
ENC005274 0.723 D0U7SH 0.349
ENC002514 0.571 D0M2YE 0.347
ENC003684 0.531 D0X9PF 0.346
ENC002515 0.530 D0N4OW 0.342
ENC003716 0.498 D09OOV 0.334
*Note: the compound similarity was calculated by RDKIT.