NPs Basic Information

Name
Penicillide
Molecular Formula C21H24O6
IUPAC Name*
6-hydroxy-2-[(1S)-1-hydroxy-3-methylbutyl]-1-methoxy-8-methyl-10H-benzo[b][1,5]benzodioxocin-12-one
SMILES
CC1=CC2=C(C(=C1)O)OC3=C(C(=C(C=C3)[C@H](CC(C)C)O)OC)C(=O)OC2
InChI
InChI=1S/C21H24O6/c1-11(2)7-15(22)14-5-6-17-18(20(14)25-4)21(24)26-10-13-8-12(3)9-16(23)19(13)27-17/h5-6,8-9,11,15,22-23H,7,10H2,1-4H3/t15-/m0/s1
InChIKey
UOWGLBYIKHMCIS-HNNXBMFYSA-N
Synonyms
PENICILLIDE; Vermixocin A; AS-186a; 55303-92-9; CHEMBL325752; 11-hydroxy-3-[(1s)-1-hydroxy-3-methylbutyl]-4-methoxy-9-methyl-5h,7h-dibenzo[b,g][1,5]dioxocin-5-one; CHEBI:65443; 2B37T22RU5; 6-hydroxy-2-[(1S)-1-hydroxy-3-methylbutyl]-1-methoxy-8-methyl-10H-benzo[b][1,5]benzodioxocin-12-one; Penicilide; 11-HYDROXY-3-((1S)-1-HYDROXY-3-METHYLBUTYL)-4-METHOXY-9-METHYL-5H,7H-DIBENZO(B,G)(1,5)DIOXOCIN-5-ONE; UNII-2B37T22RU5; SCHEMBL5940739; DTXSID90970627; ZINC6070256; BDBM50167286; HB4020; HY-126455; CS-0104589; Q27133889; 11-Hydroxy-3-((S)-1-hydroxy-3-methyl-butyl)-4-methoxy-9-methyl-7H-6,12-dioxa-dibenzo[a,d]cycloocten-5-one; 11-Hydroxy-3-(1-hydroxy-3-methylbutyl)-4-methoxy-9-methyl-5H,7H-dibenzo[b,g][1,5]dioxocin-5-one; 3-(1'-Hydroxy-3'-methylbutyl)-11-hydroxy-4-methoxy-9-methyl-5H,7H-dibenzo(c,f)(1,5)-dioxocin-5-one; 5H,7H-DIBENZO(B,G)(1,5)DIOXOCIN-5-ONE, 11-HYDROXY-3-((1S)-1-HYDROXY-3-METHYLBUTYL)-4-METHOXY-9-METHYL-; 5H,7H-Dibenzo(b,g)(1,5)dioxocin-5-one, 11-hydroxy-3-(1-hydroxy-3-methylbutyl)-4-methoxy-9-methyl-, (S)-
CAS 55303-92-9
PubChem CID 124213
ChEMBL ID CHEMBL325752
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Ethers
          • Direct Parent: Diarylethers

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 372.4 ALogp: 3.7
HBD: 2 HBA: 6
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 85.2 Aromatic Rings: 3
Heavy Atoms: 27 QED Weighted: 0.749

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.012 MDCK Permeability: 0.00002150
Pgp-inhibitor: 0.043 Pgp-substrate: 0.013
Human Intestinal Absorption (HIA): 0.017 20% Bioavailability (F20%): 0.042
30% Bioavailability (F30%): 0.003

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.293 Plasma Protein Binding (PPB): 97.97%
Volume Distribution (VD): 0.625 Fu: 3.85%

ADMET: Metabolism

CYP1A2-inhibitor: 0.862 CYP1A2-substrate: 0.849
CYP2C19-inhibitor: 0.893 CYP2C19-substrate: 0.528
CYP2C9-inhibitor: 0.799 CYP2C9-substrate: 0.873
CYP2D6-inhibitor: 0.554 CYP2D6-substrate: 0.549
CYP3A4-inhibitor: 0.46 CYP3A4-substrate: 0.454

ADMET: Excretion

Clearance (CL): 12.941 Half-life (T1/2): 0.537

ADMET: Toxicity

hERG Blockers: 0.037 Human Hepatotoxicity (H-HT): 0.019
Drug-inuced Liver Injury (DILI): 0.16 AMES Toxicity: 0.318
Rat Oral Acute Toxicity: 0.863 Maximum Recommended Daily Dose: 0.958
Skin Sensitization: 0.565 Carcinogencity: 0.922
Eye Corrosion: 0.003 Eye Irritation: 0.703
Respiratory Toxicity: 0.589
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001921 1.000 D04UTT 0.310
ENC004018 0.805 D0L1JW 0.294
ENC002005 0.773 D06GCK 0.288
ENC002740 0.724 D06GIP 0.288
ENC004016 0.721 D07MGA 0.286
ENC004017 0.682 D04TDQ 0.282
ENC006147 0.644 D02FCQ 0.277
ENC003674 0.625 D0Z1WA 0.272
ENC004019 0.621 D03DJL 0.268
ENC001927 0.606 D02LZB 0.263
*Note: the compound similarity was calculated by RDKIT.