NPs Basic Information

Name
3,3,8-Trimethyldecane
Molecular Formula C13H28
IUPAC Name*
3,3,8-trimethyldecane
SMILES
CCC(C)CCCCC(C)(C)CC
InChI
InChI=1S/C13H28/c1-6-12(3)10-8-9-11-13(4,5)7-2/h12H,6-11H2,1-5H3
InChIKey
IWDBBRKPCLWIKU-UHFFFAOYSA-N
Synonyms
3,3,8-TRIMETHYLDECANE; 62338-16-3; Decane, 3,3,8-trimethyl-; 3,3,8-Trimethyldecane #; DTXSID10977895
CAS 62338-16-3
PubChem CID 44006
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Saturated hydrocarbons
        • Subclass: Alkanes
          • Direct Parent: Branched alkanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 184.36 ALogp: 6.5
HBD: 0 HBA: 0
Rotatable Bonds: 7 Lipinski's rule of five: Rejected
Polar Surface Area: 0.0 Aromatic Rings: 0
Heavy Atoms: 13 QED Weighted: 0.467

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.438 MDCK Permeability: 0.00000834
Pgp-inhibitor: 0.09 Pgp-substrate: 0
Human Intestinal Absorption (HIA): 0.005 20% Bioavailability (F20%): 0.819
30% Bioavailability (F30%): 0.902

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.517 Plasma Protein Binding (PPB): 97.89%
Volume Distribution (VD): 2.824 Fu: 2.46%

ADMET: Metabolism

CYP1A2-inhibitor: 0.467 CYP1A2-substrate: 0.836
CYP2C19-inhibitor: 0.571 CYP2C19-substrate: 0.91
CYP2C9-inhibitor: 0.375 CYP2C9-substrate: 0.943
CYP2D6-inhibitor: 0.079 CYP2D6-substrate: 0.318
CYP3A4-inhibitor: 0.308 CYP3A4-substrate: 0.172

ADMET: Excretion

Clearance (CL): 5.616 Half-life (T1/2): 0.111

ADMET: Toxicity

hERG Blockers: 0.065 Human Hepatotoxicity (H-HT): 0.017
Drug-inuced Liver Injury (DILI): 0.042 AMES Toxicity: 0.006
Rat Oral Acute Toxicity: 0.047 Maximum Recommended Daily Dose: 0.025
Skin Sensitization: 0.656 Carcinogencity: 0.055
Eye Corrosion: 0.992 Eye Irritation: 0.957
Respiratory Toxicity: 0.527
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000900 0.622 D0D9NY 0.260
ENC001263 0.590 D05PLH 0.209
ENC000554 0.564 D0L7AS 0.200
ENC000561 0.553 D0Y3KG 0.200
ENC001130 0.535 D08QME 0.200
ENC000797 0.524 D0QC3M 0.198
ENC001239 0.511 D03LGY 0.192
ENC000769 0.500 D02KBD 0.190
ENC001131 0.468 D08SJZ 0.188
ENC001129 0.467 D05QNO 0.188
*Note: the compound similarity was calculated by RDKIT.