NPs Basic Information

Name
5-(hydroxymethyl)-3,4-dihydro-1H-2-benzopyran-1-one
Molecular Formula C10H10O3
IUPAC Name*
5-(hydroxymethyl)-3,4-dihydroisochromen-1-one
SMILES
O=C1OCCc2c(CO)cccc21
InChI
InChI=1S/C10H10O3/c11-6-7-2-1-3-9-8(7)4-5-13-10(9)12/h1-3,11H,4-6H2
InChIKey
DNNSYXUCMMUSNY-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 2-benzopyrans
          • Direct Parent: 2-benzopyrans

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 178.19 ALogp: 0.9
HBD: 1 HBA: 3
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 46.5 Aromatic Rings: 2
Heavy Atoms: 13 QED Weighted: 0.659

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.376 MDCK Permeability: 0.00002520
Pgp-inhibitor: 0.001 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.006 20% Bioavailability (F20%): 0.041
30% Bioavailability (F30%): 0.772

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.626 Plasma Protein Binding (PPB): 56.36%
Volume Distribution (VD): 1.487 Fu: 33.79%

ADMET: Metabolism

CYP1A2-inhibitor: 0.854 CYP1A2-substrate: 0.222
CYP2C19-inhibitor: 0.351 CYP2C19-substrate: 0.099
CYP2C9-inhibitor: 0.034 CYP2C9-substrate: 0.651
CYP2D6-inhibitor: 0.124 CYP2D6-substrate: 0.807
CYP3A4-inhibitor: 0.03 CYP3A4-substrate: 0.234

ADMET: Excretion

Clearance (CL): 9.581 Half-life (T1/2): 0.909

ADMET: Toxicity

hERG Blockers: 0.028 Human Hepatotoxicity (H-HT): 0.029
Drug-inuced Liver Injury (DILI): 0.173 AMES Toxicity: 0.032
Rat Oral Acute Toxicity: 0.015 Maximum Recommended Daily Dose: 0.014
Skin Sensitization: 0.379 Carcinogencity: 0.058
Eye Corrosion: 0.007 Eye Irritation: 0.973
Respiratory Toxicity: 0.056
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002244 0.511 D0N1WU 0.315
ENC001057 0.396 D0Q5MQ 0.309
ENC002310 0.368 D00IUG 0.284
ENC005720 0.352 D0Q5NX 0.268
ENC002432 0.352 D0U0KW 0.260
ENC002236 0.333 D0Z8AA 0.256
ENC005721 0.333 D03GCJ 0.250
ENC006142 0.315 D0R9EQ 0.247
ENC004791 0.304 D0A3ZU 0.243
ENC002082 0.304 D03GET 0.237
*Note: the compound similarity was calculated by RDKIT.