NPs Basic Information

Name
5-Hydroxy-2, 3-dihydroxymethyl-7-methoxychromone
Molecular Formula C12H12O6
IUPAC Name*
5-hydroxy-2,3-bis(hydroxymethyl)-7-methoxychromen-4-one
SMILES
COc1cc(O)c2c(=O)c(CO)c(CO)oc2c1
InChI
InChI=1S/C12H12O6/c1-17-6-2-8(15)11-9(3-6)18-10(5-14)7(4-13)12(11)16/h2-3,13-15H,4-5H2,1H3
InChIKey
XTIFCOOLPDEOIS-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Chromones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 252.22 ALogp: 0.5
HBD: 3 HBA: 6
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 100.1 Aromatic Rings: 2
Heavy Atoms: 18 QED Weighted: 0.75

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.011 MDCK Permeability: 0.00001980
Pgp-inhibitor: 0.001 Pgp-substrate: 0.811
Human Intestinal Absorption (HIA): 0.107 20% Bioavailability (F20%): 0.016
30% Bioavailability (F30%): 0.889

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.03 Plasma Protein Binding (PPB): 67.53%
Volume Distribution (VD): 1.018 Fu: 42.04%

ADMET: Metabolism

CYP1A2-inhibitor: 0.853 CYP1A2-substrate: 0.868
CYP2C19-inhibitor: 0.026 CYP2C19-substrate: 0.164
CYP2C9-inhibitor: 0.024 CYP2C9-substrate: 0.703
CYP2D6-inhibitor: 0.045 CYP2D6-substrate: 0.568
CYP3A4-inhibitor: 0.034 CYP3A4-substrate: 0.169

ADMET: Excretion

Clearance (CL): 4.758 Half-life (T1/2): 0.952

ADMET: Toxicity

hERG Blockers: 0.005 Human Hepatotoxicity (H-HT): 0.789
Drug-inuced Liver Injury (DILI): 0.937 AMES Toxicity: 0.558
Rat Oral Acute Toxicity: 0.045 Maximum Recommended Daily Dose: 0.025
Skin Sensitization: 0.268 Carcinogencity: 0.03
Eye Corrosion: 0.004 Eye Irritation: 0.115
Respiratory Toxicity: 0.155
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002335 0.727 D0K8KX 0.313
ENC005903 0.582 D04AIT 0.289
ENC001636 0.559 D06GCK 0.283
ENC005904 0.559 D07MUN 0.281
ENC002878 0.538 D07MGA 0.264
ENC002942 0.532 D0YH0N 0.250
ENC003860 0.500 D04UTT 0.245
ENC005647 0.493 D0Z3DY 0.236
ENC006026 0.493 D0G4KG 0.229
ENC002879 0.492 D0TC7C 0.222
*Note: the compound similarity was calculated by RDKIT.