NPs Basic Information

Name
Phomone F
Molecular Formula C11H12O6
IUPAC Name*
3-[5-(hydroxymethyl)-4-methoxy-3-methyl-6-oxopyran-2-yl]prop-2-enoicacid
SMILES
COc1c(C)c(C=CC(=O)O)oc(=O)c1CO
InChI
InChI=1S/C11H12O6/c1-6-8(3-4-9(13)14)17-11(15)7(5-12)10(6)16-2/h3-4,12H,5H2,1-2H3,(H,13,14)/b4-3+
InChIKey
PNVIMUICOUEQEE-ONEGZZNKSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 240.21 ALogp: 0.5
HBD: 2 HBA: 5
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 97.0 Aromatic Rings: 1
Heavy Atoms: 17 QED Weighted: 0.76

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.152 MDCK Permeability: 0.00001080
Pgp-inhibitor: 0 Pgp-substrate: 0.061
Human Intestinal Absorption (HIA): 0.101 20% Bioavailability (F20%): 0.064
30% Bioavailability (F30%): 0.863

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.124 Plasma Protein Binding (PPB): 69.21%
Volume Distribution (VD): 0.393 Fu: 30.08%

ADMET: Metabolism

CYP1A2-inhibitor: 0.052 CYP1A2-substrate: 0.601
CYP2C19-inhibitor: 0.024 CYP2C19-substrate: 0.058
CYP2C9-inhibitor: 0.023 CYP2C9-substrate: 0.234
CYP2D6-inhibitor: 0.011 CYP2D6-substrate: 0.159
CYP3A4-inhibitor: 0.009 CYP3A4-substrate: 0.091

ADMET: Excretion

Clearance (CL): 3.001 Half-life (T1/2): 0.933

ADMET: Toxicity

hERG Blockers: 0.009 Human Hepatotoxicity (H-HT): 0.943
Drug-inuced Liver Injury (DILI): 0.979 AMES Toxicity: 0.047
Rat Oral Acute Toxicity: 0.734 Maximum Recommended Daily Dose: 0.027
Skin Sensitization: 0.858 Carcinogencity: 0.795
Eye Corrosion: 0.004 Eye Irritation: 0.066
Respiratory Toxicity: 0.039
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005877 0.706 D05QDC 0.253
ENC004859 0.600 D0V9EN 0.250
ENC001651 0.600 D0YH0N 0.247
ENC005874 0.507 D04FBR 0.234
ENC002687 0.442 D0E6OC 0.217
ENC003737 0.420 D07JGT 0.213
ENC003971 0.371 D0B1IP 0.211
ENC005876 0.366 D0G4KG 0.210
ENC003261 0.359 D0WY9N 0.209
ENC004502 0.348 D01ZJK 0.206
*Note: the compound similarity was calculated by RDKIT.