NPs Basic Information

Name
phomopsolide F
Molecular Formula C15H20O7
IUPAC Name*
[2-(1,4-dihydroxy-3-oxopentyl)-6-oxo-2,3-dihydropyran-3-yl]2-methylbut-2-enoate
SMILES
CC=C(C)C(=O)OC1C=CC(=O)OC1C(O)CC(=O)C(C)O
InChI
InChI=1S/C15H20O7/c1-4-8(2)15(20)21-12-5-6-13(19)22-14(12)11(18)7-10(17)9(3)16/h4-6,9,11-12,14,16,18H,7H2,1-3H3/b8-4+/t9?,11?,12-,14-/m0/s1
InChIKey
QRHAQGAVPSPPFJ-NLZTZLIZSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Dihydropyranones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 312.32 ALogp: 0.0
HBD: 2 HBA: 7
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 110.1 Aromatic Rings: 1
Heavy Atoms: 22 QED Weighted: 0.541

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.648 MDCK Permeability: 0.00002260
Pgp-inhibitor: 0.008 Pgp-substrate: 0.246
Human Intestinal Absorption (HIA): 0.83 20% Bioavailability (F20%): 0.869
30% Bioavailability (F30%): 0.834

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.876 Plasma Protein Binding (PPB): 35.62%
Volume Distribution (VD): 0.256 Fu: 50.15%

ADMET: Metabolism

CYP1A2-inhibitor: 0.016 CYP1A2-substrate: 0.079
CYP2C19-inhibitor: 0.02 CYP2C19-substrate: 0.141
CYP2C9-inhibitor: 0.009 CYP2C9-substrate: 0.208
CYP2D6-inhibitor: 0.007 CYP2D6-substrate: 0.079
CYP3A4-inhibitor: 0.025 CYP3A4-substrate: 0.23

ADMET: Excretion

Clearance (CL): 3.85 Half-life (T1/2): 0.929

ADMET: Toxicity

hERG Blockers: 0.002 Human Hepatotoxicity (H-HT): 0.16
Drug-inuced Liver Injury (DILI): 0.137 AMES Toxicity: 0.019
Rat Oral Acute Toxicity: 0.054 Maximum Recommended Daily Dose: 0.578
Skin Sensitization: 0.195 Carcinogencity: 0.063
Eye Corrosion: 0.034 Eye Irritation: 0.123
Respiratory Toxicity: 0.031
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005692 0.776 D0E9KA 0.250
ENC001864 0.606 D00NPP 0.242
ENC001863 0.583 D02RQU 0.241
ENC003191 0.462 D0OL7F 0.208
ENC002128 0.392 D0ZI4H 0.202
ENC003321 0.341 D06WTZ 0.200
ENC003192 0.341 D09SIK 0.196
ENC005531 0.307 D0HD9K 0.194
ENC002163 0.291 D09WYX 0.187
ENC003827 0.284 D0T6WT 0.186
*Note: the compound similarity was calculated by RDKIT.