NPs Basic Information

Name
N-(2′-hydroxy-3′-octadecenoyl)-9-methyl-4,8-sphingadienin
Molecular Formula C37H69NO4
IUPAC Name*
N-(1,3-dihydroxy-9-methyloctadeca-4,8-dien-2-yl)-2-hydroxyoctadec-3-enamide
SMILES
CCCCCCCCCCCCCCC=CC(O)C(=O)NC(CO)C(O)C=CCCC=C(C)CCCCCCCCC
InChI
InChI=1S/C37H69NO4/c1-4-6-8-10-12-13-14-15-16-17-18-20-22-26-31-36(41)37(42)38-34(32-39)35(40)30-27-23-25-29-33(3)28-24-21-19-11-9-7-5-2/h26-27,29-31,34-36,39-41H,4-25,28,32H2,1-3H3,(H,38,42)/b30-27+,31-26+,33-29+
InChIKey
RJHACRNUPWKIQH-DNWZJMSYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Sphingolipids
        • Subclass: Ceramides
          • Direct Parent: Ceramides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 591.96 ALogp: 9.3
HBD: 4 HBA: 4
Rotatable Bonds: 30 Lipinski's rule of five: Rejected
Polar Surface Area: 89.8 Aromatic Rings: 0
Heavy Atoms: 42 QED Weighted: 0.043

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.12 MDCK Permeability: 0.00001150
Pgp-inhibitor: 0 Pgp-substrate: 0.011
Human Intestinal Absorption (HIA): 0.046 20% Bioavailability (F20%): 0.542
30% Bioavailability (F30%): 0.966

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.007 Plasma Protein Binding (PPB): 99.10%
Volume Distribution (VD): 0.662 Fu: 1.29%

ADMET: Metabolism

CYP1A2-inhibitor: 0.05 CYP1A2-substrate: 0.138
CYP2C19-inhibitor: 0.218 CYP2C19-substrate: 0.044
CYP2C9-inhibitor: 0.116 CYP2C9-substrate: 0.992
CYP2D6-inhibitor: 0.221 CYP2D6-substrate: 0.015
CYP3A4-inhibitor: 0.325 CYP3A4-substrate: 0.017

ADMET: Excretion

Clearance (CL): 3.503 Half-life (T1/2): 0.04

ADMET: Toxicity

hERG Blockers: 0.207 Human Hepatotoxicity (H-HT): 0.039
Drug-inuced Liver Injury (DILI): 0.024 AMES Toxicity: 0.012
Rat Oral Acute Toxicity: 0.011 Maximum Recommended Daily Dose: 0.011
Skin Sensitization: 0.956 Carcinogencity: 0.025
Eye Corrosion: 0.003 Eye Irritation: 0.043
Respiratory Toxicity: 0.528
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D00AOJ 0.453
D0O1PH 0.402
D07ILQ 0.398
D00STJ 0.395
D0Z1QC 0.370
D00FGR 0.338
D0T9TJ 0.331
D01NTX 0.301
D00MLW 0.301
D0O1TC 0.300
*Note: the compound similarity was calculated by RDKIT.