NPs Basic Information

Name
penicierythritol B
Molecular Formula C12H20O6
IUPAC Name*
2,3,4-trihydroxybutyl7-hydroxyocta-2,4-dienoate
SMILES
CC(O)CC=CC=CC(=O)OCC(O)C(O)CO
InChI
InChI=1S/C12H20O6/c1-9(14)5-3-2-4-6-12(17)18-8-11(16)10(15)7-13/h2-4,6,9-11,13-16H,5,7-8H2,1H3/b3-2+,6-4+/t9?,10-,11+/m0/s1
InChIKey
GSUNNKLANIQWAU-CJNLEFHFSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty alcohols
          • Direct Parent: Fatty alcohols

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 260.29 ALogp: -0.9
HBD: 4 HBA: 6
Rotatable Bonds: 8 Lipinski's rule of five: Accepted
Polar Surface Area: 107.2 Aromatic Rings: 0
Heavy Atoms: 18 QED Weighted: 0.269

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.095 MDCK Permeability: 0.00224871
Pgp-inhibitor: 0 Pgp-substrate: 0.165
Human Intestinal Absorption (HIA): 0.868 20% Bioavailability (F20%): 0.004
30% Bioavailability (F30%): 0.965

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.72 Plasma Protein Binding (PPB): 15.20%
Volume Distribution (VD): 0.584 Fu: 64.87%

ADMET: Metabolism

CYP1A2-inhibitor: 0.009 CYP1A2-substrate: 0.033
CYP2C19-inhibitor: 0.01 CYP2C19-substrate: 0.074
CYP2C9-inhibitor: 0.001 CYP2C9-substrate: 0.13
CYP2D6-inhibitor: 0 CYP2D6-substrate: 0.097
CYP3A4-inhibitor: 0.008 CYP3A4-substrate: 0.067

ADMET: Excretion

Clearance (CL): 2.429 Half-life (T1/2): 0.851

ADMET: Toxicity

hERG Blockers: 0.065 Human Hepatotoxicity (H-HT): 0.175
Drug-inuced Liver Injury (DILI): 0.013 AMES Toxicity: 0.159
Rat Oral Acute Toxicity: 0.042 Maximum Recommended Daily Dose: 0.931
Skin Sensitization: 0.648 Carcinogencity: 0.574
Eye Corrosion: 0.003 Eye Irritation: 0.021
Respiratory Toxicity: 0.253
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002791 0.366 D06HZY 0.322
ENC002842 0.365 D0VM8K 0.281
ENC004977 0.338 D0P7EK 0.279
ENC005377 0.324 D09MXS 0.279
ENC001463 0.316 D0T6VD 0.271
ENC004768 0.314 D02KFP 0.256
ENC004396 0.309 D04YPN 0.205
ENC005374 0.308 D0N3NO 0.196
ENC005376 0.307 D0B8SY 0.194
ENC000161 0.304 D00NPP 0.187
*Note: the compound similarity was calculated by RDKIT.