NPs Basic Information

Name
4-(hydroxymethyl)-3,5-dimethyl dihydrofuran-2(3H)-one
Molecular Formula C7H12O3
IUPAC Name*
4-(hydroxymethyl)-3,5-dimethyloxolan-2-one
SMILES
CC1OC(=O)C(C)C1CO
InChI
InChI=1S/C7H12O3/c1-4-6(3-8)5(2)10-7(4)9/h4-6,8H,3H2,1-2H3/t4-,5+,6-/m0/s1
InChIKey
RHMRZYPABWGFIW-JKUQZMGJSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Lactones
        • Subclass: Gamma butyrolactones
          • Direct Parent: Gamma butyrolactones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 144.17 ALogp: 0.2
HBD: 1 HBA: 3
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 46.5 Aromatic Rings: 1
Heavy Atoms: 10 QED Weighted: 0.547

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.588 MDCK Permeability: 0.00100971
Pgp-inhibitor: 0 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.007 20% Bioavailability (F20%): 0.004
30% Bioavailability (F30%): 0.205

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.969 Plasma Protein Binding (PPB): 12.90%
Volume Distribution (VD): 0.928 Fu: 82.31%

ADMET: Metabolism

CYP1A2-inhibitor: 0.229 CYP1A2-substrate: 0.525
CYP2C19-inhibitor: 0.019 CYP2C19-substrate: 0.812
CYP2C9-inhibitor: 0.004 CYP2C9-substrate: 0.256
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.276
CYP3A4-inhibitor: 0.022 CYP3A4-substrate: 0.324

ADMET: Excretion

Clearance (CL): 8.573 Half-life (T1/2): 0.758

ADMET: Toxicity

hERG Blockers: 0.007 Human Hepatotoxicity (H-HT): 0.503
Drug-inuced Liver Injury (DILI): 0.637 AMES Toxicity: 0.011
Rat Oral Acute Toxicity: 0.035 Maximum Recommended Daily Dose: 0.027
Skin Sensitization: 0.098 Carcinogencity: 0.045
Eye Corrosion: 0.041 Eye Irritation: 0.757
Respiratory Toxicity: 0.028
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002880 0.500 D0K7LU 0.230
ENC003160 0.333 D0S3WH 0.224
ENC003480 0.326 D01GYT 0.216
ENC003753 0.310 D0R2KF 0.203
ENC001221 0.310 D0CL9S 0.200
ENC003515 0.304 D07AHW 0.188
ENC004878 0.294 D0X5XU 0.186
ENC001081 0.283 D0Z8EX 0.186
ENC000944 0.282 D0X7JN 0.185
ENC001016 0.282 D03KXY 0.183
*Note: the compound similarity was calculated by RDKIT.