NPs Basic Information

Name
(Z)-7-deoxy-7,8-didehydro-12-hydroxysydonic acid
Molecular Formula C15H20O4
IUPAC Name*
3-hydroxy-4-[(Z)-7-hydroxy-6-methylhept-2-en-2-yl]benzoic acid
SMILES
CC(CC/C=C(/C)\C1=C(C=C(C=C1)C(=O)O)O)CO
InChI
InChI=1S/C15H20O4/c1-10(9-16)4-3-5-11(2)13-7-6-12(15(18)19)8-14(13)17/h5-8,10,16-17H,3-4,9H2,1-2H3,(H,18,19)/b11-5-
InChIKey
OBFGWJDPNCOFSV-WZUFQYTHSA-N
Synonyms
(Z)-7-deoxy-7,8-didehydro-12-hydroxysydonic acid
CAS NA
PubChem CID 146684348
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 264.32 ALogp: 3.1
HBD: 3 HBA: 4
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 77.8 Aromatic Rings: 1
Heavy Atoms: 19 QED Weighted: 0.732

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.761 MDCK Permeability: 0.00000561
Pgp-inhibitor: 0.002 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.364

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.16 Plasma Protein Binding (PPB): 81.69%
Volume Distribution (VD): 0.317 Fu: 19.69%

ADMET: Metabolism

CYP1A2-inhibitor: 0.359 CYP1A2-substrate: 0.259
CYP2C19-inhibitor: 0.046 CYP2C19-substrate: 0.052
CYP2C9-inhibitor: 0.149 CYP2C9-substrate: 0.055
CYP2D6-inhibitor: 0.145 CYP2D6-substrate: 0.112
CYP3A4-inhibitor: 0.063 CYP3A4-substrate: 0.098

ADMET: Excretion

Clearance (CL): 5.769 Half-life (T1/2): 0.901

ADMET: Toxicity

hERG Blockers: 0.022 Human Hepatotoxicity (H-HT): 0.819
Drug-inuced Liver Injury (DILI): 0.959 AMES Toxicity: 0.008
Rat Oral Acute Toxicity: 0.225 Maximum Recommended Daily Dose: 0.011
Skin Sensitization: 0.129 Carcinogencity: 0.129
Eye Corrosion: 0.004 Eye Irritation: 0.292
Respiratory Toxicity: 0.077
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D01WJL 0.356
D0C4YC 0.311
D08HVR 0.294
D0BA6T 0.286
D0S2BT 0.286
D0V9EN 0.284
D07HBX 0.279
D0P7JZ 0.274
D03LGG 0.273
D0U5CE 0.273
*Note: the compound similarity was calculated by RDKIT.