NPs Basic Information

Name
Geoxantether B
Molecular Formula C24H24O3
IUPAC Name*
2-[(2,7-dimethyl-9H-xanthen-4-yl)methoxymethyl]-4-methylphenol
SMILES
CC1=CC2=C(C=C1)OC3=C(C2)C=C(C=C3COCC4=C(C=CC(=C4)C)O)C
InChI
InChI=1S/C24H24O3/c1-15-4-6-22(25)20(9-15)13-26-14-21-11-17(3)10-19-12-18-8-16(2)5-7-23(18)27-24(19)21/h4-11,25H,12-14H2,1-3H3
InChIKey
NFLXOLFVSCCVDT-UHFFFAOYSA-N
Synonyms
Geoxantether B
CAS NA
PubChem CID 139588421
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Xanthenes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 360.4 ALogp: 5.3
HBD: 1 HBA: 3
Rotatable Bonds: 4 Lipinski's rule of five: Rejected
Polar Surface Area: 38.7 Aromatic Rings: 4
Heavy Atoms: 27 QED Weighted: 0.495

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.294 MDCK Permeability: 0.00002060
Pgp-inhibitor: 0.911 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.006 20% Bioavailability (F20%): 0.008
30% Bioavailability (F30%): 0.537

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.115 Plasma Protein Binding (PPB): 100.15%
Volume Distribution (VD): 0.514 Fu: 1.41%

ADMET: Metabolism

CYP1A2-inhibitor: 0.161 CYP1A2-substrate: 0.907
CYP2C19-inhibitor: 0.825 CYP2C19-substrate: 0.252
CYP2C9-inhibitor: 0.41 CYP2C9-substrate: 0.149
CYP2D6-inhibitor: 0.144 CYP2D6-substrate: 0.928
CYP3A4-inhibitor: 0.201 CYP3A4-substrate: 0.854

ADMET: Excretion

Clearance (CL): 8.968 Half-life (T1/2): 0.456

ADMET: Toxicity

hERG Blockers: 0.048 Human Hepatotoxicity (H-HT): 0.129
Drug-inuced Liver Injury (DILI): 0.297 AMES Toxicity: 0.305
Rat Oral Acute Toxicity: 0.136 Maximum Recommended Daily Dose: 0.938
Skin Sensitization: 0.93 Carcinogencity: 0.611
Eye Corrosion: 0.003 Eye Irritation: 0.915
Respiratory Toxicity: 0.096
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003683 0.617 D03DJL 0.272
ENC004017 0.336 D00NJL 0.270
ENC004018 0.325 D0BZ7W 0.265
ENC000877 0.325 D04NQI 0.265
ENC004016 0.325 D0AZ8C 0.259
ENC001921 0.325 D05HSC 0.250
ENC006146 0.324 D02FCQ 0.248
ENC006147 0.313 D0Y7PG 0.248
ENC004019 0.308 D04YMH 0.245
ENC002740 0.308 D06XZW 0.244
*Note: the compound similarity was calculated by RDKIT.