NPs Basic Information

Name
(1S,3R,4R,8S,10R,11R)-13-[(E)-hex-4-enoyl]-3,10,12-trihydroxy-6-[(2E,4E)-1-hydroxyhexa-2,4-dienylidene]-1,4,8,11-tetramethyl-2,9-dioxapentacyclo[8.4.0.03,8.04,14.07,11]tetradec-12-en-5-one
Molecular Formula C28H34O8
IUPAC Name*
(1S,3R,4R,8S,10R,11R)-13-[(E)-hex-4-enoyl]-3,10,12-trihydroxy-6-[(2E,4E)-1-hydroxyhexa-2,4-dienylidene]-1,4,8,11-tetramethyl-2,9-dioxapentacyclo[8.4.0.03,8.04,14.07,11]tetradec-12-en-5-one
SMILES
C/C=C/CCC(=O)C1=C([C@]2(C3C(=C(/C=C/C=C/C)O)C(=O)[C@]4(C1[C@]5([C@@]2(O[C@@]3([C@@]4(O5)O)C)O)C)C)C)O
InChI
InChI=1S/C28H34O8/c1-7-9-11-13-15(29)17-19-23(3)22(32)18(16(30)14-12-10-8-2)20-24(4,21(17)31)28(34)25(19,5)35-27(23,33)26(20,6)36-28/h7-11,13,19-20,29,32-34H,12,14H2,1-6H3/b9-7+,10-8+,13-11+,17-15?/t19?,20?,23-,24-,25+,26+,27-,28-/m1/s1
InChIKey
VXNANBMCYPZBSM-VPIXFZJBSA-N
Synonyms
dihydrotrichodimerol
CAS NA
PubChem CID 139587822
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Oxepanes
        • Subclass: No Rank at Level Subclass
          • Direct Parent: Oxepanes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 498.6 ALogp: 2.3
HBD: 4 HBA: 8
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 134.0 Aromatic Rings: 5
Heavy Atoms: 36 QED Weighted: 0.185

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.442 MDCK Permeability: 0.00001660
Pgp-inhibitor: 0.282 Pgp-substrate: 0.296
Human Intestinal Absorption (HIA): 0.164 20% Bioavailability (F20%): 0.003
30% Bioavailability (F30%): 0.029

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.938 Plasma Protein Binding (PPB): 87.70%
Volume Distribution (VD): 1.174 Fu: 9.42%

ADMET: Metabolism

CYP1A2-inhibitor: 0.004 CYP1A2-substrate: 0.937
CYP2C19-inhibitor: 0.022 CYP2C19-substrate: 0.794
CYP2C9-inhibitor: 0.021 CYP2C9-substrate: 0.005
CYP2D6-inhibitor: 0.001 CYP2D6-substrate: 0.058
CYP3A4-inhibitor: 0.72 CYP3A4-substrate: 0.932

ADMET: Excretion

Clearance (CL): 7.752 Half-life (T1/2): 0.049

ADMET: Toxicity

hERG Blockers: 0.006 Human Hepatotoxicity (H-HT): 0.153
Drug-inuced Liver Injury (DILI): 0.786 AMES Toxicity: 0.179
Rat Oral Acute Toxicity: 0.966 Maximum Recommended Daily Dose: 0.927
Skin Sensitization: 0.538 Carcinogencity: 0.976
Eye Corrosion: 0.004 Eye Irritation: 0.018
Respiratory Toxicity: 0.975
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004472 0.670 D0H2MO 0.217
ENC002144 0.569 D0E9KA 0.195
ENC003709 0.532 D0WY9N 0.187
ENC005987 0.500 D03ZFG 0.186
ENC003187 0.488 D0FG6M 0.184
ENC003579 0.469 D02DGU 0.183
ENC005695 0.457 D0G3PI 0.183
ENC004085 0.447 D00DKK 0.183
ENC002133 0.440 D02QJH 0.182
ENC003500 0.425 D03ZZK 0.180
*Note: the compound similarity was calculated by RDKIT.