NPs Basic Information

Name
(3S)-3,4-Dihydro-5,8-dihydroxy-3-hydroxymethyl-1H-2-benzopyran-1-one
Molecular Formula C10H10O5
IUPAC Name*
(3S)-5,8-dihydroxy-3-(hydroxymethyl)-3,4-dihydroisochromen-1-one
SMILES
C1[C@H](OC(=O)C2=C(C=CC(=C21)O)O)CO
InChI
InChI=1S/C10H10O5/c11-4-5-3-6-7(12)1-2-8(13)9(6)10(14)15-5/h1-2,5,11-13H,3-4H2/t5-/m0/s1
InChIKey
ZWUDMMSALBLKBH-YFKPBYRVSA-N
Synonyms
Botryoisocoumarin A; (3S)-3,4-Dihydro-5,8-dihydroxy-3-hydroxymethyl-1H-2-benzopyran-1-one
CAS NA
PubChem CID 122372566
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Benzenoids
      • Class: Benzene and substituted d
        • Subclass: Benzoic acids and derivat
          • Direct Parent: Hydroxybenzoic acid deriv

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 210.18 ALogp: 1.0
HBD: 3 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 87.0 Aromatic Rings: 2
Heavy Atoms: 15 QED Weighted: 0.466

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.074 MDCK Permeability: 0.00003670
Pgp-inhibitor: 0.001 Pgp-substrate: 0.001
Human Intestinal Absorption (HIA): 0.893 20% Bioavailability (F20%): 0.898
30% Bioavailability (F30%): 0.995

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.143 Plasma Protein Binding (PPB): 72.89%
Volume Distribution (VD): 0.663 Fu: 28.29%

ADMET: Metabolism

CYP1A2-inhibitor: 0.352 CYP1A2-substrate: 0.106
CYP2C19-inhibitor: 0.041 CYP2C19-substrate: 0.067
CYP2C9-inhibitor: 0.023 CYP2C9-substrate: 0.751
CYP2D6-inhibitor: 0.186 CYP2D6-substrate: 0.327
CYP3A4-inhibitor: 0.095 CYP3A4-substrate: 0.141

ADMET: Excretion

Clearance (CL): 14.903 Half-life (T1/2): 0.925

ADMET: Toxicity

hERG Blockers: 0.008 Human Hepatotoxicity (H-HT): 0.18
Drug-inuced Liver Injury (DILI): 0.645 AMES Toxicity: 0.244
Rat Oral Acute Toxicity: 0.059 Maximum Recommended Daily Dose: 0.02
Skin Sensitization: 0.327 Carcinogencity: 0.349
Eye Corrosion: 0.005 Eye Irritation: 0.281
Respiratory Toxicity: 0.168
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005939 0.681 D07MGA 0.308
ENC002310 0.547 D07AHW 0.286
ENC005023 0.519 D07MOX 0.281
ENC005535 0.500 D08HVR 0.279
ENC002309 0.491 D0BA6T 0.270
ENC005781 0.475 D0T7OW 0.268
ENC004808 0.474 D0V9EN 0.267
ENC005940 0.474 D04PHC 0.267
ENC005995 0.463 D0P7JZ 0.258
ENC004979 0.444 D02NSF 0.256
*Note: the compound similarity was calculated by RDKIT.