NPs Basic Information

Name
[(1S,2R,11R)-1,2,5-trimethylspiro[8-oxatricyclo[7.2.1.02,7]dodec-5-ene-12,2'-oxirane]-11-yl] acetate
Molecular Formula C17H24O4
IUPAC Name*
[(1S,2R,11R)-1,2,5-trimethylspiro[8-oxatricyclo[7.2.1.02,7]dodec-5-ene-12,2'-oxirane]-11-yl] acetate
SMILES
CC1=CC2[C@](CC1)([C@]3([C@@H](CC(C34CO4)O2)OC(=O)C)C)C
InChI
InChI=1S/C17H24O4/c1-10-5-6-15(3)12(7-10)21-14-8-13(20-11(2)18)16(15,4)17(14)9-19-17/h7,12-14H,5-6,8-9H2,1-4H3/t12?,13-,14?,15+,16-,17?/m1/s1
InChIKey
HNEGCRMUYSKRRR-JYOWGIDJSA-N
Synonyms
Trichodermin; 12,13-Epoxytrichothec-9-en-4-ol acetate
CAS NA
PubChem CID 102515163
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Trichothecenes

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 292.4 ALogp: 1.8
HBD: 0 HBA: 4
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 48.1 Aromatic Rings: 4
Heavy Atoms: 21 QED Weighted: 0.422

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.812 MDCK Permeability: 0.00002390
Pgp-inhibitor: 0.03 Pgp-substrate: 0.002
Human Intestinal Absorption (HIA): 0.004 20% Bioavailability (F20%): 0.006
30% Bioavailability (F30%): 0.02

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.316 Plasma Protein Binding (PPB): 76.49%
Volume Distribution (VD): 2.063 Fu: 22.84%

ADMET: Metabolism

CYP1A2-inhibitor: 0.05 CYP1A2-substrate: 0.246
CYP2C19-inhibitor: 0.095 CYP2C19-substrate: 0.846
CYP2C9-inhibitor: 0.066 CYP2C9-substrate: 0.062
CYP2D6-inhibitor: 0.009 CYP2D6-substrate: 0.247
CYP3A4-inhibitor: 0.23 CYP3A4-substrate: 0.424

ADMET: Excretion

Clearance (CL): 5.202 Half-life (T1/2): 0.27

ADMET: Toxicity

hERG Blockers: 0.018 Human Hepatotoxicity (H-HT): 0.64
Drug-inuced Liver Injury (DILI): 0.767 AMES Toxicity: 0.532
Rat Oral Acute Toxicity: 0.187 Maximum Recommended Daily Dose: 0.252
Skin Sensitization: 0.145 Carcinogencity: 0.181
Eye Corrosion: 0.003 Eye Irritation: 0.071
Respiratory Toxicity: 0.231
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005756 0.773 D04GJN 0.276
ENC002231 0.683 D0I2SD 0.263
ENC006152 0.611 D09WYX 0.261
ENC004001 0.560 D0V2JK 0.260
ENC001879 0.559 D0R2KY 0.250
ENC001856 0.495 D06IIB 0.248
ENC002662 0.382 D0Y2YP 0.248
ENC003086 0.358 D06AEO 0.243
ENC004900 0.357 D02JNM 0.241
ENC004446 0.347 D0P0HT 0.240
*Note: the compound similarity was calculated by RDKIT.