NPs Basic Information

Name
Phomoxydiene C
Molecular Formula C14H14O3
IUPAC Name*
(5E)-5-[[(1S,6R,7S,8S)-8-methyl-9-oxabicyclo[4.2.1]nona-2,4-dien-7-yl]methylidene]furan-2-one
SMILES
C[C@@H]1[C@@H]2C=CC=C[C@H]([C@@H]1/C=C/3\C=CC(=O)O3)O2
InChI
InChI=1S/C14H14O3/c1-9-11(8-10-6-7-14(15)16-10)13-5-3-2-4-12(9)17-13/h2-9,11-13H,1H3/b10-8+/t9-,11+,12-,13+/m0/s1
InChIKey
YCZBPXQBANGRGF-DGVLQFKPSA-N
Synonyms
Phomoxydiene C; CHEMBL4435961; 5-[[(1beta,6beta)-8alpha-Methyl-9-oxabicyclo[4.2.1]nona-2,4-diene-7alpha-yl]methylene]furan-2(5H)-one
CAS NA
PubChem CID 101253160
ChEMBL ID CHEMBL4435961
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Dihydrofurans
        • Subclass: Furanones
          • Direct Parent: Butenolides

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 230.26 ALogp: 2.3
HBD: 0 HBA: 3
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 35.5 Aromatic Rings: 3
Heavy Atoms: 17 QED Weighted: 0.65

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.699 MDCK Permeability: 0.00001590
Pgp-inhibitor: 0.003 Pgp-substrate: 0.187
Human Intestinal Absorption (HIA): 0.015 20% Bioavailability (F20%): 0.025
30% Bioavailability (F30%): 0.002

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.197 Plasma Protein Binding (PPB): 92.73%
Volume Distribution (VD): 1.867 Fu: 7.24%

ADMET: Metabolism

CYP1A2-inhibitor: 0.655 CYP1A2-substrate: 0.081
CYP2C19-inhibitor: 0.087 CYP2C19-substrate: 0.093
CYP2C9-inhibitor: 0.211 CYP2C9-substrate: 0.091
CYP2D6-inhibitor: 0.017 CYP2D6-substrate: 0.203
CYP3A4-inhibitor: 0.066 CYP3A4-substrate: 0.234

ADMET: Excretion

Clearance (CL): 9.039 Half-life (T1/2): 0.611

ADMET: Toxicity

hERG Blockers: 0.216 Human Hepatotoxicity (H-HT): 0.344
Drug-inuced Liver Injury (DILI): 0.403 AMES Toxicity: 0.887
Rat Oral Acute Toxicity: 0.958 Maximum Recommended Daily Dose: 0.978
Skin Sensitization: 0.926 Carcinogencity: 0.578
Eye Corrosion: 0.009 Eye Irritation: 0.412
Respiratory Toxicity: 0.973
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005195 1.000 D0L1WV 0.181
ENC003105 0.493 D0Z8EX 0.177
ENC002139 0.440 D02FEM 0.170
ENC003623 0.408 D03KXY 0.160
ENC003704 0.367 D0K7LU 0.153
ENC005196 0.367 D0P1WA 0.150
ENC002650 0.333 D0WE3O 0.147
ENC003465 0.303 D0D5GG 0.147
ENC003467 0.303 D0M2MC 0.145
ENC002454 0.279 D08SKH 0.145
*Note: the compound similarity was calculated by RDKIT.