NPs Basic Information

Name
Phomapyrone B
Molecular Formula C12H16O4
IUPAC Name*
4-hydroxy-3-methyl-6-(3-methyl-2-oxopentyl)pyran-2-one
SMILES
CCC(C)C(=O)CC1=CC(=C(C(=O)O1)C)O
InChI
InChI=1S/C12H16O4/c1-4-7(2)10(13)5-9-6-11(14)8(3)12(15)16-9/h6-7,14H,4-5H2,1-3H3
InChIKey
CRWYBXBKGMHTRM-UHFFFAOYSA-N
Synonyms
Phomapyrone B
CAS NA
PubChem CID 54676992
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 224.25 ALogp: 1.5
HBD: 1 HBA: 4
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 63.6 Aromatic Rings: 1
Heavy Atoms: 16 QED Weighted: 0.852

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.607 MDCK Permeability: 0.00001690
Pgp-inhibitor: 0.001 Pgp-substrate: 0.03
Human Intestinal Absorption (HIA): 0.009 20% Bioavailability (F20%): 0.013
30% Bioavailability (F30%): 0.003

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.023 Plasma Protein Binding (PPB): 90.67%
Volume Distribution (VD): 0.398 Fu: 16.74%

ADMET: Metabolism

CYP1A2-inhibitor: 0.083 CYP1A2-substrate: 0.814
CYP2C19-inhibitor: 0.036 CYP2C19-substrate: 0.646
CYP2C9-inhibitor: 0.1 CYP2C9-substrate: 0.908
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.503
CYP3A4-inhibitor: 0.02 CYP3A4-substrate: 0.378

ADMET: Excretion

Clearance (CL): 8.755 Half-life (T1/2): 0.87

ADMET: Toxicity

hERG Blockers: 0.003 Human Hepatotoxicity (H-HT): 0.3
Drug-inuced Liver Injury (DILI): 0.841 AMES Toxicity: 0.026
Rat Oral Acute Toxicity: 0.502 Maximum Recommended Daily Dose: 0.024
Skin Sensitization: 0.283 Carcinogencity: 0.475
Eye Corrosion: 0.027 Eye Irritation: 0.162
Respiratory Toxicity: 0.142
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004199 0.608 D06GIP 0.246
ENC002813 0.551 D0O6KE 0.242
ENC006097 0.551 D0L5FY 0.235
ENC004559 0.527 D06REO 0.232
ENC004625 0.509 D0A5JP 0.229
ENC004938 0.485 D0A4JK 0.227
ENC004051 0.467 D0WY9N 0.226
ENC005125 0.447 D08HUC 0.225
ENC004050 0.443 D0P5CD 0.224
ENC006098 0.438 D0I5HV 0.224
*Note: the compound similarity was calculated by RDKIT.