NPs Basic Information

Name
Phomoarcherin C
Molecular Formula C23H30O4
IUPAC Name*
(4aR,6aS,12aR,12bS)-11-hydroxy-4,4,6a,9,12b-pentamethyl-3-oxo-2,4a,5,6,12,12a-hexahydro-1H-benzo[a]xanthene-8-carbaldehyde
SMILES
CC1=CC(=C2C[C@@H]3[C@]4(CCC(=O)C([C@@H]4CC[C@@]3(OC2=C1C=O)C)(C)C)C)O
InChI
InChI=1S/C23H30O4/c1-13-10-16(25)14-11-18-22(4)8-7-19(26)21(2,3)17(22)6-9-23(18,5)27-20(14)15(13)12-24/h10,12,17-18,25H,6-9,11H2,1-5H3/t17-,18+,22-,23-/m0/s1
InChIKey
JDDYDTDIIFQNAG-WKZKVMAPSA-N
Synonyms
Phomoarcherin C; CHEBI:67847; CHEMBL1773757; Q27136323
CAS NA
PubChem CID 52952105
ChEMBL ID CHEMBL1773757
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Isoflavonoids
        • Subclass: Isoflavans
          • Direct Parent: Isoflavanols

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 370.5 ALogp: 4.0
HBD: 1 HBA: 4
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 63.6 Aromatic Rings: 4
Heavy Atoms: 27 QED Weighted: 0.7

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.033 MDCK Permeability: 0.00001990
Pgp-inhibitor: 0.057 Pgp-substrate: 0.004
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.005
30% Bioavailability (F30%): 0.841

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.325 Plasma Protein Binding (PPB): 90.04%
Volume Distribution (VD): 1.217 Fu: 6.68%

ADMET: Metabolism

CYP1A2-inhibitor: 0.221 CYP1A2-substrate: 0.869
CYP2C19-inhibitor: 0.159 CYP2C19-substrate: 0.863
CYP2C9-inhibitor: 0.216 CYP2C9-substrate: 0.899
CYP2D6-inhibitor: 0.137 CYP2D6-substrate: 0.451
CYP3A4-inhibitor: 0.339 CYP3A4-substrate: 0.52

ADMET: Excretion

Clearance (CL): 14.519 Half-life (T1/2): 0.38

ADMET: Toxicity

hERG Blockers: 0.024 Human Hepatotoxicity (H-HT): 0.264
Drug-inuced Liver Injury (DILI): 0.05 AMES Toxicity: 0.027
Rat Oral Acute Toxicity: 0.319 Maximum Recommended Daily Dose: 0.835
Skin Sensitization: 0.128 Carcinogencity: 0.21
Eye Corrosion: 0.004 Eye Irritation: 0.624
Respiratory Toxicity: 0.973
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002749 0.685 D04GJN 0.259
ENC002748 0.531 D0G8BV 0.257
ENC001980 0.519 D0L7AS 0.256
ENC003130 0.514 D0W2EK 0.256
ENC002994 0.429 D0C7JF 0.250
ENC001452 0.419 D02NSF 0.250
ENC002386 0.415 D01CKY 0.246
ENC002118 0.413 D04JHN 0.243
ENC002033 0.400 D0Q6NZ 0.241
ENC005020 0.387 D0Z1XD 0.241
*Note: the compound similarity was calculated by RDKIT.