NPs Basic Information

Name
Guignardone B
Molecular Formula C17H24O5
IUPAC Name*
(1S,4R,7R,8S,12R)-12-hydroxy-7-(2-hydroxypropan-2-yl)-4-methyl-3,14-dioxatetracyclo[10.2.1.02,10.04,8]pentadec-2(10)-en-11-one
SMILES
C[C@@]12CC[C@H]([C@@H]1CC3=C(O2)[C@@H]4C[C@](C3=O)(CO4)O)C(C)(C)O
InChI
InChI=1S/C17H24O5/c1-15(2,19)10-4-5-16(3)11(10)6-9-13(22-16)12-7-17(20,8-21-12)14(9)18/h10-12,19-20H,4-8H2,1-3H3/t10-,11+,12+,16-,17-/m1/s1
InChIKey
PBDZWPWWXYHYII-PRNVEUERSA-N
Synonyms
Guignardone B; CHEMBL3754295
CAS NA
PubChem CID 50905843
ChEMBL ID CHEMBL3754295
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic oxygen compounds
      • Class: Organooxygen compounds
        • Subclass: Carbonyl compounds
          • Direct Parent: Cyclohexenones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 308.4 ALogp: 0.3
HBD: 2 HBA: 5
Rotatable Bonds: 1 Lipinski's rule of five: Accepted
Polar Surface Area: 76.0 Aromatic Rings: 4
Heavy Atoms: 22 QED Weighted: 0.772

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.811 MDCK Permeability: 0.00001230
Pgp-inhibitor: 0.1 Pgp-substrate: 0.009
Human Intestinal Absorption (HIA): 0.008 20% Bioavailability (F20%): 0.102
30% Bioavailability (F30%): 0.032

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.658 Plasma Protein Binding (PPB): 62.68%
Volume Distribution (VD): 0.696 Fu: 31.86%

ADMET: Metabolism

CYP1A2-inhibitor: 0.027 CYP1A2-substrate: 0.377
CYP2C19-inhibitor: 0.047 CYP2C19-substrate: 0.782
CYP2C9-inhibitor: 0.034 CYP2C9-substrate: 0.044
CYP2D6-inhibitor: 0.009 CYP2D6-substrate: 0.084
CYP3A4-inhibitor: 0.027 CYP3A4-substrate: 0.598

ADMET: Excretion

Clearance (CL): 3.352 Half-life (T1/2): 0.263

ADMET: Toxicity

hERG Blockers: 0.02 Human Hepatotoxicity (H-HT): 0.423
Drug-inuced Liver Injury (DILI): 0.806 AMES Toxicity: 0.424
Rat Oral Acute Toxicity: 0.207 Maximum Recommended Daily Dose: 0.462
Skin Sensitization: 0.302 Carcinogencity: 0.615
Eye Corrosion: 0.004 Eye Irritation: 0.119
Respiratory Toxicity: 0.103
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC006129 0.694 D07QKN 0.278
ENC006127 0.686 D0C7JF 0.271
ENC002719 0.686 D0U3GL 0.260
ENC006126 0.675 D0L2LS 0.250
ENC003657 0.622 D0Q6NZ 0.248
ENC003341 0.593 D0G6AB 0.245
ENC003609 0.545 D0W3OS 0.240
ENC003340 0.538 D0Z1XD 0.235
ENC002721 0.513 D04GJN 0.231
ENC003344 0.434 D0Q4SD 0.231
*Note: the compound similarity was calculated by RDKIT.