NPs Basic Information

Name
variecolorin G
Molecular Formula C24H29N3O2
IUPAC Name*
(3S,6Z)-3-methyl-6-[[2-(2-methylbut-3-en-2-yl)-7-(3-methylbut-2-enyl)-1H-indol-3-yl]methylidene]piperazine-2,5-dione
SMILES
C[C@H]1C(=O)N/C(=C\C2=C(NC3=C(C=CC=C23)CC=C(C)C)C(C)(C)C=C)/C(=O)N1
InChI
InChI=1S/C24H29N3O2/c1-7-24(5,6)21-18(13-19-23(29)25-15(4)22(28)26-19)17-10-8-9-16(20(17)27-21)12-11-14(2)3/h7-11,13,15,27H,1,12H2,2-6H3,(H,25,29)(H,26,28)/b19-13-/t15-/m0/s1
InChIKey
CVRBXJYAJQNPNW-CCNLRRDASA-N
Synonyms
variecolorin G; CHEMBL251051
CAS NA
PubChem CID 23655738
ChEMBL ID CHEMBL251051
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organic acids and derivat
      • Class: Carboxylic acids and deri
        • Subclass: Amino acids, peptides, an
          • Direct Parent: Alpha amino acids and der

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 391.5 ALogp: 5.3
HBD: 3 HBA: 2
Rotatable Bonds: 5 Lipinski's rule of five: Accepted
Polar Surface Area: 74.0 Aromatic Rings: 3
Heavy Atoms: 29 QED Weighted: 0.51

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.108 MDCK Permeability: 0.00001540
Pgp-inhibitor: 0.706 Pgp-substrate: 0.011
Human Intestinal Absorption (HIA): 0.049 20% Bioavailability (F20%): 0.942
30% Bioavailability (F30%): 0.052

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.026 Plasma Protein Binding (PPB): 99.41%
Volume Distribution (VD): 0.222 Fu: 1.23%

ADMET: Metabolism

CYP1A2-inhibitor: 0.487 CYP1A2-substrate: 0.818
CYP2C19-inhibitor: 0.772 CYP2C19-substrate: 0.065
CYP2C9-inhibitor: 0.897 CYP2C9-substrate: 0.814
CYP2D6-inhibitor: 0.891 CYP2D6-substrate: 0.487
CYP3A4-inhibitor: 0.837 CYP3A4-substrate: 0.77

ADMET: Excretion

Clearance (CL): 3.186 Half-life (T1/2): 0.602

ADMET: Toxicity

hERG Blockers: 0.027 Human Hepatotoxicity (H-HT): 0.843
Drug-inuced Liver Injury (DILI): 0.983 AMES Toxicity: 0.005
Rat Oral Acute Toxicity: 0.76 Maximum Recommended Daily Dose: 0.057
Skin Sensitization: 0.13 Carcinogencity: 0.065
Eye Corrosion: 0.003 Eye Irritation: 0.019
Respiratory Toxicity: 0.981
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC006144 0.756 D0W7WC 0.227
ENC002630 0.756 D01PZD 0.226
ENC004230 0.723 D0R0MW 0.223
ENC004457 0.693 D0N1WU 0.221
ENC002716 0.691 D0O6KE 0.220
ENC002069 0.663 D0Q0PR 0.215
ENC005569 0.648 D0WN0U 0.207
ENC001957 0.648 D01AYJ 0.205
ENC003865 0.552 D0JO3U 0.197
ENC002895 0.542 D0A3ZU 0.196
*Note: the compound similarity was calculated by RDKIT.