NPs Basic Information

Name
Paecilin B
Molecular Formula C16H16O7
IUPAC Name*
methyl 5-hydroxy-2-(3-methyl-5-oxooxolan-2-yl)-4-oxo-3H-chromene-2-carboxylate
SMILES
CC1CC(=O)OC1C2(CC(=O)C3=C(C=CC=C3O2)O)C(=O)OC
InChI
InChI=1S/C16H16O7/c1-8-6-12(19)22-14(8)16(15(20)21-2)7-10(18)13-9(17)4-3-5-11(13)23-16/h3-5,8,14,17H,6-7H2,1-2H3
InChIKey
QOBIDOOHIOXPIA-UHFFFAOYSA-N
Synonyms
Paecilin B; methyl 5-hydroxy-2-(3-methyl-5-oxooxolan-2-yl)-4-oxo-3H-chromene-2-carboxylate
CAS NA
PubChem CID 23582931
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Benzopyrans
        • Subclass: 1-benzopyrans
          • Direct Parent: Chromones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 320.29 ALogp: 1.8
HBD: 1 HBA: 7
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 99.1 Aromatic Rings: 3
Heavy Atoms: 23 QED Weighted: 0.828

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.994 MDCK Permeability: 0.00002180
Pgp-inhibitor: 0.138 Pgp-substrate: 0
Human Intestinal Absorption (HIA): 0.058 20% Bioavailability (F20%): 0.015
30% Bioavailability (F30%): 0.934

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.945 Plasma Protein Binding (PPB): 74.03%
Volume Distribution (VD): 0.484 Fu: 23.31%

ADMET: Metabolism

CYP1A2-inhibitor: 0.35 CYP1A2-substrate: 0.654
CYP2C19-inhibitor: 0.416 CYP2C19-substrate: 0.297
CYP2C9-inhibitor: 0.258 CYP2C9-substrate: 0.703
CYP2D6-inhibitor: 0.039 CYP2D6-substrate: 0.344
CYP3A4-inhibitor: 0.753 CYP3A4-substrate: 0.347

ADMET: Excretion

Clearance (CL): 16.039 Half-life (T1/2): 0.61

ADMET: Toxicity

hERG Blockers: 0.017 Human Hepatotoxicity (H-HT): 0.316
Drug-inuced Liver Injury (DILI): 0.918 AMES Toxicity: 0.078
Rat Oral Acute Toxicity: 0.433 Maximum Recommended Daily Dose: 0.019
Skin Sensitization: 0.068 Carcinogencity: 0.725
Eye Corrosion: 0.003 Eye Irritation: 0.031
Respiratory Toxicity: 0.039
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005613 0.658 D07MGA 0.278
ENC005614 0.658 D0S0LZ 0.267
ENC003348 0.446 D08NQZ 0.267
ENC004794 0.443 D01XWG 0.258
ENC002975 0.435 D0H1AR 0.256
ENC005856 0.435 D0J2NK 0.252
ENC005729 0.430 D07VLY 0.252
ENC005885 0.424 D0C9XJ 0.252
ENC005733 0.421 D01XDL 0.248
ENC005727 0.419 D08LTU 0.240
*Note: the compound similarity was calculated by RDKIT.