NPs Basic Information

Name
2H-1-Benzopyran-2-one, 3,5,7-trihydroxy-
Molecular Formula C9H6O5
IUPAC Name*
3,5,7-trihydroxychromen-2-one
SMILES
C1=C(C=C2C(=C1O)C=C(C(=O)O2)O)O
InChI
InChI=1S/C9H6O5/c10-4-1-6(11)5-3-7(12)9(13)14-8(5)2-4/h1-3,10-12H
InChIKey
UVXDWGJSULDKQU-UHFFFAOYSA-N
Synonyms
2H-1-Benzopyran-2-one, 3,5,7-trihydroxy-; 3,5,7-trihydroxychromen-2-one; 22065-07-2; Coumarin, 3,5,7-trihydroxy-; 3,5,7-Trihydroxycoumarin; SCHEMBL5305472; ZINC33846793; 3,5,7-Trihydroxy-2H-chromen-2-one #; DA-08048; FT-0763764
CAS NA
PubChem CID 5375352
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Phenylpropanoids and poly
      • Class: Coumarins and derivatives
        • Subclass: Hydroxycoumarins
          • Direct Parent: 7-hydroxycoumarins

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 194.14 ALogp: 1.1
HBD: 3 HBA: 5
Rotatable Bonds: 0 Lipinski's rule of five: Accepted
Polar Surface Area: 87.0 Aromatic Rings: 2
Heavy Atoms: 14 QED Weighted: 0.55

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.858 MDCK Permeability: 0.00000848
Pgp-inhibitor: 0.001 Pgp-substrate: 0.942
Human Intestinal Absorption (HIA): 0.013 20% Bioavailability (F20%): 0.97
30% Bioavailability (F30%): 0.998

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.033 Plasma Protein Binding (PPB): 81.85%
Volume Distribution (VD): 0.537 Fu: 19.20%

ADMET: Metabolism

CYP1A2-inhibitor: 0.92 CYP1A2-substrate: 0.199
CYP2C19-inhibitor: 0.062 CYP2C19-substrate: 0.053
CYP2C9-inhibitor: 0.261 CYP2C9-substrate: 0.866
CYP2D6-inhibitor: 0.221 CYP2D6-substrate: 0.483
CYP3A4-inhibitor: 0.332 CYP3A4-substrate: 0.081

ADMET: Excretion

Clearance (CL): 13.474 Half-life (T1/2): 0.9

ADMET: Toxicity

hERG Blockers: 0.05 Human Hepatotoxicity (H-HT): 0.131
Drug-inuced Liver Injury (DILI): 0.952 AMES Toxicity: 0.075
Rat Oral Acute Toxicity: 0.057 Maximum Recommended Daily Dose: 0.793
Skin Sensitization: 0.912 Carcinogencity: 0.043
Eye Corrosion: 0.273 Eye Irritation: 0.942
Respiratory Toxicity: 0.169
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC004389 0.579 D04AIT 0.433
ENC005361 0.550 D0K8KX 0.420
ENC001773 0.550 D07EXH 0.378
ENC001652 0.525 D07MGA 0.356
ENC003471 0.508 D06GCK 0.259
ENC004844 0.508 D0V9EN 0.259
ENC001951 0.491 D02UFG 0.258
ENC004676 0.490 D0M8RC 0.250
ENC001542 0.490 D0FA2O 0.250
ENC005370 0.490 D07MOX 0.250
*Note: the compound similarity was calculated by RDKIT.