NPs Basic Information

Name
Vomifoliol
Molecular Formula C13H20O3
IUPAC Name*
(4S)-4-hydroxy-4-[(E,3R)-3-hydroxybut-1-enyl]-3,5,5-trimethylcyclohex-2-en-1-one
SMILES
CC1=CC(=O)CC([C@]1(/C=C/[C@@H](C)O)O)(C)C
InChI
InChI=1S/C13H20O3/c1-9-7-11(15)8-12(3,4)13(9,16)6-5-10(2)14/h5-7,10,14,16H,8H2,1-4H3/b6-5+/t10-,13-/m1/s1
InChIKey
KPQMCAKZRXOZLB-KOIHBYQTSA-N
Synonyms
Vomifoliol; 23526-45-6; (6S,9R)-vomifoliol; BLUMENOL A; Roseoside aglycon; (6S,9R)-6-hydroxy-3-oxo-alpha-ionol; (+/-)-Volifoliol; (+/-)-Blumenol-A; (+)-Vomifoliol; CHEBI:49164; (4S)-4-hydroxy-4-[(E,3R)-3-hydroxybut-1-enyl]-3,5,5-trimethylcyclohex-2-en-1-one; B7QV234K84; P86438KC5J; (6S,7E,9R)-6,9-dihydroxy-4,7-megastigmadien-3-one; FEMA no. 4661, (4S,3R)-(E)-(+/-)-; 2-Cyclohexen-1-one, 4-hydroxy-4-((1E,3R)-3-hydroxy-1-buten-1-yl)-3,5,5-trimethyl-, (4S)-; 2-Cyclohexen-1-one, 4-hydroxy-4-((1E,3R)-3-hydroxy-1-butenyl)-3,5,5-trimethyl-, (4S)-; 2-Cyclohexen-1-one, 4-hydroxy-4-(3-hydroxy-1-butenyl)-3,5,5-trimethyl-, (R*,S*-(E))-; 2-Cyclohexen-1-one, 4-hydroxy-4-(3-hydroxy-1-butenyl)-3,5,5-trimethyl-, (S-(R*,S*-(E)))-; 4-Hydroxy-4-(3-hydroxy-1-butenyl)-3,5,5-trimethyl-2-cyclohexen-1-one, (4S,3R)-(E)-(+/-)-; 2-Cyclohexen-1-one, 4-hydroxy-4-((1E,3R)-3-hydroxy-1-buten-1-yl)-3,5,5-trimethyl-, (4S)-rel-; 2-Cyclohexen-1-one, 4-hydroxy-4-(3-hydroxy-1-butenyl)-3,5,5-trimethyl-, (R*,S*-(E))-(+/-)-; 50763-73-0; (4S)-4-hydroxy-4-[(1E,3R)-3-hydroxybut-1-enyl]-3,5,5-trimethylcyclohex-2-en-1-one; (+-)-Vomifoliol; Vomifoliol, (+)-; (+-)-Blumenol A; Vomifoliol, (+-)-; UNII-B7QV234K84; UNII-P86438KC5J; (+)-BLUMENOL A; CHEMBL463088; SCHEMBL1243896; DTXSID601009964; HY-N1077; ZINC4095719; (+-)-6-hydroxy-3-oxo-alpha-ionol; BDBM50463336; NSC805019; AKOS032948398; NSC-805019; 2-Cyclohexen-1-one, 4-hydroxy-4-(3-hydroxy-1-butenyl)-3,5,5-trimethyl-, (+-)-; CS-0016364; C01760; (6S,9R)-6-HYDROXY-3-OXO-.ALPHA.-IONOL; Q22911785; (4S)-4-hydroxy-4-[(1E,3R)-3-hydroxybut-1-en-1-yl]-3,5,5-trimethylcyclohex-2-en-1-one; 2-CYCLOHEXEN-1-ONE, 4-HYDROXY-4-(3-HYDROXY-1-BUTENYL)-3,5,5-TRIMETHYL-, (+)-
CAS 23526-45-6
PubChem CID 5280462
ChEMBL ID CHEMBL463088
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Sesquiterpenoids
          • Direct Parent: Sesquiterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 224.3 ALogp: 0.5
HBD: 2 HBA: 3
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 57.5 Aromatic Rings: 1
Heavy Atoms: 16 QED Weighted: 0.707

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.654 MDCK Permeability: 0.00002260
Pgp-inhibitor: 0.001 Pgp-substrate: 0.098
Human Intestinal Absorption (HIA): 0.012 20% Bioavailability (F20%): 0.007
30% Bioavailability (F30%): 0.003

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.665 Plasma Protein Binding (PPB): 74.50%
Volume Distribution (VD): 0.858 Fu: 24.29%

ADMET: Metabolism

CYP1A2-inhibitor: 0.023 CYP1A2-substrate: 0.407
CYP2C19-inhibitor: 0.1 CYP2C19-substrate: 0.849
CYP2C9-inhibitor: 0.042 CYP2C9-substrate: 0.2
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.11
CYP3A4-inhibitor: 0.017 CYP3A4-substrate: 0.753

ADMET: Excretion

Clearance (CL): 4.999 Half-life (T1/2): 0.537

ADMET: Toxicity

hERG Blockers: 0.03 Human Hepatotoxicity (H-HT): 0.418
Drug-inuced Liver Injury (DILI): 0.169 AMES Toxicity: 0.009
Rat Oral Acute Toxicity: 0.822 Maximum Recommended Daily Dose: 0.966
Skin Sensitization: 0.457 Carcinogencity: 0.744
Eye Corrosion: 0.004 Eye Irritation: 0.09
Respiratory Toxicity: 0.97
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC002418 0.491 D04GJN 0.211
ENC000146 0.340 D04ATM 0.209
ENC005579 0.309 D0L2LS 0.205
ENC001370 0.267 D0H6VY 0.203
ENC004213 0.260 D0Z1XD 0.200
ENC004208 0.257 D0I2SD 0.198
ENC004209 0.257 D0IX6I 0.191
ENC006101 0.257 D0P0HT 0.189
ENC002957 0.256 D0Q6NZ 0.189
ENC004904 0.254 D0I5DS 0.188
*Note: the compound similarity was calculated by RDKIT.