NPs Basic Information

Name
Cyclopentane, 4-pentenylidene
Molecular Formula C10H16
IUPAC Name*
pent-4-enylidenecyclopentane
SMILES
C=CCCC=C1CCCC1
InChI
InChI=1S/C10H16/c1-2-3-4-7-10-8-5-6-9-10/h2,7H,1,3-6,8-9H2
InChIKey
UYISGPPEYKFIKW-UHFFFAOYSA-N
Synonyms
Cyclopentane, 4-pentenylidene; 3-[(Z)-2-Phenylethenyl]cholestan-2-one
CAS NA
PubChem CID 523531
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Hydrocarbons
      • Class: Unsaturated hydrocarbons
        • Subclass: Branched unsaturated hydr
          • Direct Parent: Branched unsaturated hydr

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 136.23 ALogp: 3.3
HBD: 0 HBA: 0
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 0.0 Aromatic Rings: 1
Heavy Atoms: 10 QED Weighted: 0.403

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.426 MDCK Permeability: 0.00002140
Pgp-inhibitor: 0.119 Pgp-substrate: 0
Human Intestinal Absorption (HIA): 0.003 20% Bioavailability (F20%): 0.933
30% Bioavailability (F30%): 0.968

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.838 Plasma Protein Binding (PPB): 95.11%
Volume Distribution (VD): 1.899 Fu: 2.43%

ADMET: Metabolism

CYP1A2-inhibitor: 0.917 CYP1A2-substrate: 0.379
CYP2C19-inhibitor: 0.393 CYP2C19-substrate: 0.333
CYP2C9-inhibitor: 0.325 CYP2C9-substrate: 0.872
CYP2D6-inhibitor: 0.116 CYP2D6-substrate: 0.86
CYP3A4-inhibitor: 0.25 CYP3A4-substrate: 0.168

ADMET: Excretion

Clearance (CL): 7.013 Half-life (T1/2): 0.407

ADMET: Toxicity

hERG Blockers: 0.008 Human Hepatotoxicity (H-HT): 0.091
Drug-inuced Liver Injury (DILI): 0.036 AMES Toxicity: 0.012
Rat Oral Acute Toxicity: 0.028 Maximum Recommended Daily Dose: 0.513
Skin Sensitization: 0.919 Carcinogencity: 0.903
Eye Corrosion: 0.548 Eye Irritation: 0.985
Respiratory Toxicity: 0.192
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001222 0.286 D0Y7XC 0.211
ENC000901 0.256 D0E6YQ 0.177
ENC001712 0.240 D03MZQ 0.156
ENC000686 0.235 D04QWE 0.154
ENC000450 0.225 D0J0ZS 0.148
ENC000518 0.220 D03WAJ 0.145
ENC001201 0.212 D0Q4YK 0.143
ENC000639 0.205 D0Z5BC 0.140
ENC001261 0.200 D0UM7O 0.138
ENC001318 0.196 D0K5WS 0.138
*Note: the compound similarity was calculated by RDKIT.