NPs Basic Information

Name
Integracide B
Molecular Formula C32H50O5
IUPAC Name*
[(2R,3R,5R,10S,11R,12R,13R,17R)-2,3,11-trihydroxy-4,4,10,13-tetramethyl-17-[(2R)-6-methyl-5-methylideneheptan-2-yl]-1,2,3,5,6,7,11,12,16,17-decahydrocyclopenta[a]phenanthren-12-yl] acetate
SMILES
C[C@H](CCC(=C)C(C)C)[C@H]1CC=C2[C@@]1([C@H]([C@@H](C3=C2CC[C@@H]4[C@@]3(C[C@H]([C@@H](C4(C)C)O)O)C)O)OC(=O)C)C
InChI
InChI=1S/C32H50O5/c1-17(2)18(3)10-11-19(4)22-13-14-23-21-12-15-25-30(6,7)28(36)24(34)16-31(25,8)26(21)27(35)29(32(22,23)9)37-20(5)33/h14,17,19,22,24-25,27-29,34-36H,3,10-13,15-16H2,1-2,4-9H3/t19-,22-,24-,25+,27-,28+,29+,31+,32-/m1/s1
InChIKey
VCOKSAAKIDFNQE-PGHPLGCHSA-N
Synonyms
Integracide B; CHEMBL464128; SCHEMBL4742500; BDBM50250713; [(2R,3R,5R,10S,11R,12R,13R,17R)-2,3,11-trihydroxy-4,4,10,13-tetramethyl-17-[(2R)-6-methyl-5-methylideneheptan-2-yl]-1,2,3,5,6,7,11,12,16,17-decahydrocyclopenta[a]phenanthren-12-yl] acetate; [(2R,3R,5R,10S,11R,12R,13R,17R)-17-[(1R)-1,5-dimethyl-4-methylene-hexyl]-2,3,11-trihydroxy-4,4,10,13-tetramethyl-1,2,3,5,6,7,11,12,16,17-decahydrocyclopenta[a]phenanthren-12-yl] acetate; 24-Methylene-30-nor-5alpha-lanostane-8,14-diene-2alpha,3beta,11beta,12alpha-tetrol 12-acetate; Ergosta-8,14,24(28)-triene-2,3,11,12-tetrol, 4,4-dimethyl-, 12-acetate, (2.alpha.,3.beta.,5.alpha.,11.beta.,12.alpha.)-
CAS NA
PubChem CID 503621
ChEMBL ID CHEMBL464128
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Steroids and steroid deri
        • Subclass: Ergostane steroids
          • Direct Parent: Ergosterols and derivativ

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 514.7 ALogp: 5.6
HBD: 3 HBA: 5
Rotatable Bonds: 7 Lipinski's rule of five: Rejected
Polar Surface Area: 87.0 Aromatic Rings: 4
Heavy Atoms: 37 QED Weighted: 0.305

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.053 MDCK Permeability: 0.00001390
Pgp-inhibitor: 0.997 Pgp-substrate: 0.164
Human Intestinal Absorption (HIA): 0.004 20% Bioavailability (F20%): 0.376
30% Bioavailability (F30%): 0.671

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.002 Plasma Protein Binding (PPB): 95.39%
Volume Distribution (VD): 1.482 Fu: 3.03%

ADMET: Metabolism

CYP1A2-inhibitor: 0.035 CYP1A2-substrate: 0.097
CYP2C19-inhibitor: 0.029 CYP2C19-substrate: 0.813
CYP2C9-inhibitor: 0.224 CYP2C9-substrate: 0.419
CYP2D6-inhibitor: 0.095 CYP2D6-substrate: 0.09
CYP3A4-inhibitor: 0.602 CYP3A4-substrate: 0.649

ADMET: Excretion

Clearance (CL): 2.779 Half-life (T1/2): 0.375

ADMET: Toxicity

hERG Blockers: 0.293 Human Hepatotoxicity (H-HT): 0.341
Drug-inuced Liver Injury (DILI): 0.253 AMES Toxicity: 0.015
Rat Oral Acute Toxicity: 0.227 Maximum Recommended Daily Dose: 0.921
Skin Sensitization: 0.387 Carcinogencity: 0.007
Eye Corrosion: 0.003 Eye Irritation: 0.015
Respiratory Toxicity: 0.954
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003486 1.000 D0X7XG 0.288
ENC003755 0.821 D0H2MO 0.278
ENC003487 0.721 D0OR2L 0.273
ENC003485 0.710 D03ZTE 0.268
ENC002075 0.415 D0G3SH 0.268
ENC005630 0.368 D0Y7LD 0.266
ENC002718 0.353 D0M4WA 0.259
ENC005968 0.348 D08SVH 0.250
ENC001603 0.348 D0E9KA 0.241
ENC002119 0.338 D09WYX 0.240
*Note: the compound similarity was calculated by RDKIT.