NPs Basic Information

Name
Monomethyl succinate
Molecular Formula C5H8O4
IUPAC Name*
4-methoxy-4-oxobutanoic acid
SMILES
COC(=O)CCC(=O)O
InChI
InChI=1S/C5H8O4/c1-9-5(8)3-2-4(6)7/h2-3H2,1H3,(H,6,7)
InChIKey
JDRMYOQETPMYQX-UHFFFAOYSA-N
Synonyms
4-Methoxy-4-oxobutanoic acid; Monomethyl succinate; 3878-55-5; Mono-Methyl Succinate; Succinic acid monomethyl ester; Methyl hydrogen succinate; Succinic acid, monomethyl ester; 3-Carbomethoxypropanoic acid; Butanedioic acid, monomethyl ester; mono-Methyl hydrogen succinate; MFCD00002788; YA2V724S0A; butanedioic acid 1-methyl ester; butanedioic acid monomethyl ester; Butanedioic acid, 1-methyl ester; NSC-511; UNII-YA2V724S0A; 3-(methoxycarbonyl)propanoic acid; NSC 511; EINECS 223-408-2; Succinic acid 1-methyl; AI3-03389; DSSTox_CID_24425; DSSTox_RID_80218; Monomethyl hydrogen succinate; DSSTox_GSID_44425; succinic acid 4-methyl ester; SCHEMBL164072; 3-methoxycarbonylpropionic acid; NSC511; DTXSID7044425; 4-Methoxy-4-oxobutanoic acid #; BDBM82193; CHEBI:75146; JDRMYOQETPMYQX-UHFFFAOYSA-; 4-(methyloxy)-4-oxobutanoic acid; ZINC152993; Tox21_302188; mono-Methyl hydrogen succinate, 95%; STL068961; ACIDYELLOW25(C.I.18835); AKOS000264979; CS-W011096; GS-3418; NCGC00257549-01; BP-23493; SY009523; CAS-3878-55-5; AM20100028; BB 0254379; FT-0618900; M3262; EN300-24949; A855318; J-515649; Q21045268; Z57663583; F1107-0326
CAS 3878-55-5
PubChem CID 77487
ChEMBL ID NA
*Note: the IUPAC Name was collected from PubChem.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty acid esters
          • Direct Parent: Fatty acid methyl esters

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 132.11 ALogp: 0.0
HBD: 1 HBA: 4
Rotatable Bonds: 4 Lipinski's rule of five: Accepted
Polar Surface Area: 63.6 Aromatic Rings: 0
Heavy Atoms: 9 QED Weighted: 0.565

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -5.401 MDCK Permeability: 0.00222148
Pgp-inhibitor: 0.002 Pgp-substrate: 0.003
Human Intestinal Absorption (HIA): 0.023 20% Bioavailability (F20%): 0.005
30% Bioavailability (F30%): 0.93

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.966 Plasma Protein Binding (PPB): 14.47%
Volume Distribution (VD): 0.24 Fu: 78.61%

ADMET: Metabolism

CYP1A2-inhibitor: 0.011 CYP1A2-substrate: 0.134
CYP2C19-inhibitor: 0.024 CYP2C19-substrate: 0.058
CYP2C9-inhibitor: 0.003 CYP2C9-substrate: 0.878
CYP2D6-inhibitor: 0.017 CYP2D6-substrate: 0.192
CYP3A4-inhibitor: 0.012 CYP3A4-substrate: 0.045

ADMET: Excretion

Clearance (CL): 7.75 Half-life (T1/2): 0.858

ADMET: Toxicity

hERG Blockers: 0.006 Human Hepatotoxicity (H-HT): 0.117
Drug-inuced Liver Injury (DILI): 0.167 AMES Toxicity: 0.018
Rat Oral Acute Toxicity: 0.006 Maximum Recommended Daily Dose: 0.025
Skin Sensitization: 0.131 Carcinogencity: 0.061
Eye Corrosion: 0.984 Eye Irritation: 0.965
Respiratory Toxicity: 0.029
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC000234 0.581 D0OL6O 0.581
ENC000062 0.536 D06VNK 0.536
ENC001036 0.486 D0Y7ZD 0.484
ENC003372 0.419 D0O4GY 0.469
ENC000018 0.407 D00ENY 0.371
ENC001253 0.405 D0G4JI 0.333
ENC000516 0.386 D0EP8X 0.323
ENC000235 0.382 D0E4WR 0.318
ENC006075 0.375 D0Z0MG 0.302
ENC000643 0.375 D07SJT 0.298
*Note: the compound similarity was calculated by RDKIT.