NPs Basic Information

Name
trichodermic acid C
Molecular Formula C19H28O4
IUPAC Name*
5-(6,7-dihydroxy-2,6,8-trimethyl-2,4a,5,7,8,8a-hexahydro-1H-naphthalen-1-yl)-2-methylpenta-2,4-dienoicacid
SMILES
CC(=CC=CC1C(C)C=CC2CC(C)(O)C(O)C(C)C21)C(=O)O
InChI
InChI=1S/C19H28O4/c1-11-8-9-14-10-19(4,23)17(20)13(3)16(14)15(11)7-5-6-12(2)18(21)22/h5-9,11,13-17,20,23H,10H2,1-4H3,(H,21,22)/b7-5+,12-6+/t11-,13-,14-,15-,16-,17+,19-/m0/s1
InChIKey
PZQIWYHUBURGMO-KREIQRPBSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Fatty Acyls
        • Subclass: Fatty acids and conjugate
          • Direct Parent: Medium-chain fatty acids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 320.43 ALogp: 2.8
HBD: 3 HBA: 3
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 77.8 Aromatic Rings: 2
Heavy Atoms: 23 QED Weighted: 0.422

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.683 MDCK Permeability: 0.00002950
Pgp-inhibitor: 0 Pgp-substrate: 0.012
Human Intestinal Absorption (HIA): 0.721 20% Bioavailability (F20%): 0.007
30% Bioavailability (F30%): 0.01

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.948 Plasma Protein Binding (PPB): 92.67%
Volume Distribution (VD): 0.683 Fu: 6.96%

ADMET: Metabolism

CYP1A2-inhibitor: 0.018 CYP1A2-substrate: 0.162
CYP2C19-inhibitor: 0.015 CYP2C19-substrate: 0.608
CYP2C9-inhibitor: 0.023 CYP2C9-substrate: 0.34
CYP2D6-inhibitor: 0.005 CYP2D6-substrate: 0.141
CYP3A4-inhibitor: 0.057 CYP3A4-substrate: 0.238

ADMET: Excretion

Clearance (CL): 2.071 Half-life (T1/2): 0.66

ADMET: Toxicity

hERG Blockers: 0.035 Human Hepatotoxicity (H-HT): 0.078
Drug-inuced Liver Injury (DILI): 0.281 AMES Toxicity: 0.004
Rat Oral Acute Toxicity: 0.421 Maximum Recommended Daily Dose: 0.511
Skin Sensitization: 0.069 Carcinogencity: 0.057
Eye Corrosion: 0.003 Eye Irritation: 0.014
Respiratory Toxicity: 0.828
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC006079 0.690 D0E9KA 0.243
ENC003166 0.662 D0F1EX 0.225
ENC006078 0.459 D03IKT 0.214
ENC003167 0.452 D0X7XG 0.212
ENC002015 0.313 D0P0HT 0.209
ENC003292 0.273 D08PIQ 0.207
ENC003293 0.268 D04SFH 0.206
ENC003630 0.261 D0C8HR 0.197
ENC002817 0.259 D02RQU 0.193
ENC003781 0.258 D00GOS 0.193
*Note: the compound similarity was calculated by RDKIT.