NPs Basic Information

Name
pyrenosetin E
Molecular Formula C25H35NO5
IUPAC Name*
3-(3-hydroxybut-1-enyl)-5'-(hydroxymethyl)-1',4,7,9b-tetramethylspiro[3,3a,5a,6,7,8,9,9a-octahydrocyclopenta[a]naphthalene-2,3'-pyrrolidine]-1,2',4'-trione
SMILES
CC1=CC2CC(C)CCC2C2(C)C(=O)C3(C(=O)C(CO)N(C)C3=O)C(C=CC(C)O)C12
InChI
InChI=1S/C25H35NO5/c1-13-6-8-17-16(10-13)11-14(2)20-18(9-7-15(3)28)25(22(30)24(17,20)4)21(29)19(12-27)26(5)23(25)31/h7,9,11,13,15-20,27-28H,6,8,10,12H2,1-5H3/b9-7+/t13-,15-,16+,17-,18+,19-,20+,24+,25+/m0/s1
InChIKey
JBZGVPJZPTUTAU-OBGJEZBRSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Lipids and lipid-like mol
      • Class: Prenol lipids
        • Subclass: Diterpenoids
          • Direct Parent: Diterpenoids

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 429.56 ALogp: 2.1
HBD: 2 HBA: 5
Rotatable Bonds: 3 Lipinski's rule of five: Accepted
Polar Surface Area: 94.9 Aromatic Rings: 4
Heavy Atoms: 31 QED Weighted: 0.531

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.883 MDCK Permeability: 0.00009290
Pgp-inhibitor: 0.125 Pgp-substrate: 0.859
Human Intestinal Absorption (HIA): 0.327 20% Bioavailability (F20%): 0.007
30% Bioavailability (F30%): 0.025

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.872 Plasma Protein Binding (PPB): 78.22%
Volume Distribution (VD): 0.97 Fu: 23.04%

ADMET: Metabolism

CYP1A2-inhibitor: 0.004 CYP1A2-substrate: 0.867
CYP2C19-inhibitor: 0.078 CYP2C19-substrate: 0.93
CYP2C9-inhibitor: 0.019 CYP2C9-substrate: 0.521
CYP2D6-inhibitor: 0.002 CYP2D6-substrate: 0.107
CYP3A4-inhibitor: 0.826 CYP3A4-substrate: 0.935

ADMET: Excretion

Clearance (CL): 11.9 Half-life (T1/2): 0.098

ADMET: Toxicity

hERG Blockers: 0.001 Human Hepatotoxicity (H-HT): 0.078
Drug-inuced Liver Injury (DILI): 0.893 AMES Toxicity: 0.008
Rat Oral Acute Toxicity: 0.714 Maximum Recommended Daily Dose: 0.101
Skin Sensitization: 0.031 Carcinogencity: 0.308
Eye Corrosion: 0.003 Eye Irritation: 0.008
Respiratory Toxicity: 0.803
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
D0E9KA 0.260
D0I5DS 0.248
D0W2EK 0.238
D04SFH 0.238
D0IL7L 0.222
D0IX6I 0.222
D06AEO 0.222
D0I1LH 0.220
D0CZ1Q 0.219
D0D2TN 0.219
*Note: the compound similarity was calculated by RDKIT.