NPs Basic Information

Name
Phomoparagin C
Molecular Formula C28H35NO3
IUPAC Name*
15-benzyl-11,13-dihydroxy-5,7,15-trimethyl-14-methylidene-17-azatetracyclo[10.7.0.01,16.03,10]nonadeca-2,4-dien-18-one
SMILES
C=C1C(C)C2C(Cc3ccccc3)NC(=O)C23C=C2C=C(C)CC(C)CC(O)C2C3C1O
InChI
InChI=1S/C28H35NO3/c1-15-10-16(2)12-22(30)23-20(11-15)14-28-24(17(3)18(4)26(31)25(23)28)21(29-27(28)32)13-19-8-6-5-7-9-19/h5-9,11,14,16-17,21-26,30-31H,4,10,12-13H2,1-3H3,(H,29,32)/b15-11-/t16-,17-,21+,22-,23-,24+,25+,26-,28-/m1/s1
InChIKey
BASYGHALCGCYQB-MMKKTPGVSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Isoindoles and derivative
        • Subclass: Isoindolines
          • Direct Parent: Isoindolones

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 433.59 ALogp: 3.8
HBD: 3 HBA: 3
Rotatable Bonds: 2 Lipinski's rule of five: Accepted
Polar Surface Area: 69.6 Aromatic Rings: 5
Heavy Atoms: 32 QED Weighted: 0.603

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.9 MDCK Permeability: 0.00008440
Pgp-inhibitor: 0.004 Pgp-substrate: 0.004
Human Intestinal Absorption (HIA): 0.348 20% Bioavailability (F20%): 0.004
30% Bioavailability (F30%): 0.001

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.798 Plasma Protein Binding (PPB): 88.65%
Volume Distribution (VD): 2.034 Fu: 8.21%

ADMET: Metabolism

CYP1A2-inhibitor: 0.031 CYP1A2-substrate: 0.295
CYP2C19-inhibitor: 0.648 CYP2C19-substrate: 0.758
CYP2C9-inhibitor: 0.355 CYP2C9-substrate: 0.575
CYP2D6-inhibitor: 0.059 CYP2D6-substrate: 0.349
CYP3A4-inhibitor: 0.878 CYP3A4-substrate: 0.764

ADMET: Excretion

Clearance (CL): 10.386 Half-life (T1/2): 0.05

ADMET: Toxicity

hERG Blockers: 0.163 Human Hepatotoxicity (H-HT): 0.252
Drug-inuced Liver Injury (DILI): 0.041 AMES Toxicity: 0.013
Rat Oral Acute Toxicity: 0.981 Maximum Recommended Daily Dose: 0.9
Skin Sensitization: 0.619 Carcinogencity: 0.114
Eye Corrosion: 0.003 Eye Irritation: 0.008
Respiratory Toxicity: 0.948
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC003937 0.667 D0IN7I 0.250
ENC004540 0.664 D0SP3D 0.247
ENC005759 0.621 D09NNH 0.247
ENC006133 0.548 D0V3ZA 0.247
ENC003955 0.521 D06CWH 0.245
ENC003685 0.521 D0NS6H 0.241
ENC003936 0.521 D0UA0I 0.239
ENC004243 0.513 D0I0DL 0.234
ENC004120 0.508 D01TSI 0.233
ENC003956 0.504 D05VQI 0.231
*Note: the compound similarity was calculated by RDKIT.