NPs Basic Information

Name
Cytospone J
Molecular Formula C12H18O5
IUPAC Name*
5-(hydroxymethyl)-6-(4-hydroxypentyl)-4-methoxypyran-2-one
SMILES
COc1cc(=O)oc(CCCC(C)O)c1CO
InChI
InChI=1S/C12H18O5/c1-8(14)4-3-5-10-9(7-13)11(16-2)6-12(15)17-10/h6,8,13-14H,3-5,7H2,1-2H3
InChIKey
HPKMLHFNXBHGNU-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 242.27 ALogp: 0.8
HBD: 2 HBA: 5
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 79.9 Aromatic Rings: 1
Heavy Atoms: 17 QED Weighted: 0.785

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.819 MDCK Permeability: 0.00035239
Pgp-inhibitor: 0.002 Pgp-substrate: 0.654
Human Intestinal Absorption (HIA): 0.031 20% Bioavailability (F20%): 0.02
30% Bioavailability (F30%): 0.643

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.329 Plasma Protein Binding (PPB): 36.17%
Volume Distribution (VD): 0.77 Fu: 61.81%

ADMET: Metabolism

CYP1A2-inhibitor: 0.299 CYP1A2-substrate: 0.93
CYP2C19-inhibitor: 0.033 CYP2C19-substrate: 0.486
CYP2C9-inhibitor: 0.012 CYP2C9-substrate: 0.63
CYP2D6-inhibitor: 0.011 CYP2D6-substrate: 0.757
CYP3A4-inhibitor: 0.012 CYP3A4-substrate: 0.229

ADMET: Excretion

Clearance (CL): 8.13 Half-life (T1/2): 0.913

ADMET: Toxicity

hERG Blockers: 0.008 Human Hepatotoxicity (H-HT): 0.813
Drug-inuced Liver Injury (DILI): 0.604 AMES Toxicity: 0.066
Rat Oral Acute Toxicity: 0.014 Maximum Recommended Daily Dose: 0.057
Skin Sensitization: 0.157 Carcinogencity: 0.064
Eye Corrosion: 0.003 Eye Irritation: 0.059
Respiratory Toxicity: 0.023
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC005636 0.673 D0U5CE 0.244
ENC003466 0.673 D03LGG 0.244
ENC001982 0.564 D02XJY 0.234
ENC003311 0.556 D0Q9ON 0.233
ENC002732 0.544 D09GYT 0.229
ENC002549 0.485 D06REO 0.221
ENC005635 0.485 D0T1LK 0.220
ENC003474 0.483 D08VYV 0.220
ENC003262 0.474 D01SAT 0.219
ENC004524 0.429 D07MUN 0.215
*Note: the compound similarity was calculated by RDKIT.