NPs Basic Information

Name
Cytospone F
Molecular Formula C13H18O6
IUPAC Name*
methyl5-hydroxy-5-(4-methoxy-3-methyl-6-oxopyran-2-yl)pentanoate
SMILES
COC(=O)CCCC(O)c1oc(=O)cc(OC)c1C
InChI
InChI=1S/C13H18O6/c1-8-10(17-2)7-12(16)19-13(8)9(14)5-4-6-11(15)18-3/h7,9,14H,4-6H2,1-3H3
InChIKey
YQKYPQWCRSRAKI-UHFFFAOYSA-N
Synonyms
NA
CAS NA
PubChem CID NA
ChEMBL ID NA
*Note: the IUPAC Name was calculated by STOUT. Reference: PMID:33906675.
Chemical Classification:
  • Kingdom: Organic compounds
    • Superclass: Organoheterocyclic compou
      • Class: Pyrans
        • Subclass: Pyranones and derivatives
          • Direct Parent: Pyranones and derivatives

ClassyFire Version 1.0
PMID:27867422

NPs Species Source

Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference
Endophyte ID Endophyte Name Family Genus Taxonomy ID GenBank ID Closest GenBank ID Reference

NPs Content

*Note: The vaules in Content Percentage are calculated by dividing the content value by the maximum content value in NP Content.
**Note: The units with different NP content, due to their incomparable values, are separated into different tables.

NPs Biological Activity

Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name
Bioactivity Name Target ID Target Name Target Type Target Organism Target Organism ID Potency of Bioactivity Activity Type Value Unit Endophyte ID Endophyte Name

NPs Physi-Chem Properties

Molecular Weight: 270.28 ALogp: 1.3
HBD: 1 HBA: 6
Rotatable Bonds: 6 Lipinski's rule of five: Accepted
Polar Surface Area: 86.0 Aromatic Rings: 1
Heavy Atoms: 19 QED Weighted: 0.793

NPs ADMET Properties*

ADMET: Absorption

Caco-2 Permeability: -4.751 MDCK Permeability: 0.00016354
Pgp-inhibitor: 0.005 Pgp-substrate: 0.2
Human Intestinal Absorption (HIA): 0.05 20% Bioavailability (F20%): 0.018
30% Bioavailability (F30%): 0.816

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB): 0.865 Plasma Protein Binding (PPB): 51.61%
Volume Distribution (VD): 0.773 Fu: 44.62%

ADMET: Metabolism

CYP1A2-inhibitor: 0.108 CYP1A2-substrate: 0.813
CYP2C19-inhibitor: 0.129 CYP2C19-substrate: 0.715
CYP2C9-inhibitor: 0.026 CYP2C9-substrate: 0.55
CYP2D6-inhibitor: 0.01 CYP2D6-substrate: 0.48
CYP3A4-inhibitor: 0.017 CYP3A4-substrate: 0.384

ADMET: Excretion

Clearance (CL): 9.48 Half-life (T1/2): 0.908

ADMET: Toxicity

hERG Blockers: 0.005 Human Hepatotoxicity (H-HT): 0.796
Drug-inuced Liver Injury (DILI): 0.401 AMES Toxicity: 0.018
Rat Oral Acute Toxicity: 0.029 Maximum Recommended Daily Dose: 0.193
Skin Sensitization: 0.128 Carcinogencity: 0.046
Eye Corrosion: 0.005 Eye Irritation: 0.089
Respiratory Toxicity: 0.03
*Note: the ADMET properties was calculated by ADMETlab 2.0. Reference: PMID: 33893803.

Similar Compounds*

Compounds similar to EMNPD with top10 similarity:

Similar NPs Similar Drugs
NPs ID NPs 2D Structure Similarity Score TTD ID Drug 2D Structure Similarity Score
ENC001413 0.600 D02XJY 0.299
ENC005632 0.524 D03XTC 0.267
ENC004526 0.522 D0U5CE 0.258
ENC005634 0.516 D03LGG 0.258
ENC004527 0.500 D0L5FY 0.253
ENC003474 0.492 D09GYT 0.247
ENC004525 0.478 D0D0YM 0.242
ENC003311 0.471 D0OL6O 0.242
ENC004523 0.457 D0ZI4H 0.238
ENC003263 0.444 D05VIX 0.238
*Note: the compound similarity was calculated by RDKIT.